Billgrantia tianxiuensis: EKK97_20610
Help
Entry
EKK97_20610 CDS
T08051
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
htx
Billgrantia tianxiuensis
Pathway
htx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
htx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EKK97_20610 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htx03021
]
EKK97_20610 (rpoB)
03400 DNA repair and recombination proteins [BR:
htx03400
]
EKK97_20610 (rpoB)
Enzymes [BR:
htx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EKK97_20610 (rpoB)
Transcription machinery [BR:
htx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EKK97_20610 (rpoB)
DNA repair and recombination proteins [BR:
htx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EKK97_20610 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
7TMR-HDED
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
QHC51526
UniProt:
A0A6I6SRZ2
LinkDB
All DBs
Position
complement(4418817..4422896)
Genome browser
AA seq
1359 aa
AA seq
DB search
MAYSYTEKKRIRKDFGKLPQVMDVPYLLAIQLDSYYDFLQQDRSADERLEVGLHAAFKSV
FPIESFSGNAALEYVSYRFGTPAFDVKECQLRGVTYSAPLRVKVRLIIYDRDSSNKAIKD
IKEQEVYMGEIPLMTENGTFVVNGTERVIVSQLHRSPGVFFDHDKGKSHSSGKLLYSARV
IPYRGSWLDFEFDPKDNVFVRIDRRRKLPATVLLRALGMSAEEILDEFFDTSTFHIEKSG
FSVDLVPSRLRGETATFDIKDADGNLIVEEGRRITQKHIRQLEKAGLERLEVPMDYLFGK
TLAKDQVDPNTGELICSCNTVVTPELLEKLGQAGITKLETLYTNDLDCGPFISETLRLDT
TSSQLEALVEIYRMMRPGEPPTKEAAETLFHNLFFTEDRYDLSGVGRMKFNRRLRREADT
GSGVLDNRDILDVLKELIYIRNGFGEVDDIDHLGNRRIRCVGEMAENQFRVGLVRVERAV
KERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGP
GGLTRERAGFEVRDVHATHYGRLCPIETPEGPNIGLINSLATYSHTNSYGFLETPYRKVV
DRQVTDEVVHLSAIEEGDYVIAQASASVDESGKLVDDLVQVRHKGETTFMRPEQVTLMDV
SPRQVVSVAAALIPFLEHDDANRALMGSNMQRQAVPTLRAEKPLVGTGMERFVARDSGVC
AVARRGGVIDSVDAKRIVVRINEDEIIGGEAGVDIYNLTKYVRSNQNTCMNQRPIVRPGD
VVERGDILADGPSVDMGDLALGQNMRIAFMPWNGYNFEDSILLSERVVQEDRFTTIHIQE
LTCVSRDTKLGPEEITSDIPNVGESALSKLDEAGVVYIGAEVGPGDILVGKVTPKGETQL
TPEEKLLRAIFGEKASDVKDTSLRAPTGMKGTVIDVQVFTRDGVEKDSRALAIEQMQLDE
VRKDLQETYRIAEDATFERLKRTLSGQPVNGGPKLKKGDVLSDSYLEELPRQQWFKLRLQ
DESLNELLAQADEQLENRRKEMEERFEDKKRKLTQGDDLAPGVLKIVKVYMAVKRRIQPG
DKMAGRHGNKGVISAIMPVEDMPFDDNGVPVDIVLNPLGVPSRMNVGQILETHLGLAAHG
LGQKIDTLLRDARSQQMAEMREFLGQVYNSTTGTRVEDIDSLTDDEVIALAKNLRGGVPM
ASPVFDGAQEHEIKQLLRLADLPDSGQMTLYDGRTGDAFDRPVTVGYMYMLKLNHLVDDK
MHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGRT
KMYKSIVDGDHTMHAGMPESFNVLVKEIRSLGIDIELES
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcatacactgagaaaaaacgcatccgcaaggatttcggcaaactgccccaa
gtgatggatgtgccctacctgctggcgatccagcttgattcctactacgacttcctccag
caggaccgctcggccgatgagcgtctcgaggtggggctgcatgcggcgttcaagtccgtg
ttcccgatcgagagcttctccggaaatgccgcgctcgagtacgtcagctaccgtttcggc
accccggcgttcgacgtcaaggagtgccaactgcgtggcgtcacctactccgctcccttg
cgggtcaaggttcgcttgatcatctacgatcgcgactcctcgaacaaggccatcaaggac
atcaaggagcaggaagtctacatgggggagatccccctgatgaccgaaaacggtaccttc
gtggtcaacggcaccgaacgggtcatcgtttcccagctgcaccgctcaccgggcgtgttc
ttcgatcatgacaagggcaagagccactcttccggcaaactgctctattccgcccgggtg
atcccctaccgcggttcctggctcgacttcgagttcgatcccaaggacaacgtcttcgtg
cgtatcgaccgtcgccgcaagctgccggccacggtgctgctgcgtgcgttgggcatgagt
gccgaggagatcctcgacgagttcttcgataccagcactttccacatcgagaagagcggc
ttctccgtggatctggtgccgtcgcgcctgcgcggcgagaccgccaccttcgacatcaag
gatgccgatggcaacctgatcgtcgaggaagggcggcgcatcacccagaaacatatccgc
cagttggagaaggccggcctcgagcgtctcgaggtgccgatggactatctgttcggcaag
acgctggccaaggatcaggtcgatccgaataccggtgagctgatctgctcctgcaatacc
gtcgtcacgccggagctgctcgagaagctgggtcaggccggtatcaccaagctcgagacc
ctctacaccaacgacctcgactgcggtccgttcatctccgagaccctgcgcctggatacc
accagctcgcagctcgaagcgctggtcgagatctaccgcatgatgcgccccggcgagccg
cccaccaaggaggccgccgagacgctgttccacaacctgttcttcaccgaggaccgctac
gacctctccggcgtcggtcgcatgaagttcaaccgccgcctgcgccgcgaagccgacact
ggttccggcgtgctcgacaaccgcgacatcctcgacgtactcaaggaactgatctatatc
cgcaacggcttcggcgaagtcgacgatatcgatcacctgggcaaccgtcgtatccgctgt
gtcggcgagatggctgagaaccagttccgcgtcggcctggtgcgtgtcgagcgtgcggtc
aaggaacgtctctccatggccgagagcgaaggcctgatgccgcaggacctgatcaacgcc
aagccggtggcggcggcggtcaaggagttcttcggctccagccagctctcccagttcatg
gaccagaacaatccgctttccgaggtcactcacaagcgccgcgtctccgcgcttgggccg
ggcggcctgacccgcgagcgggccggcttcgaggtgcgtgacgttcacgccacgcactat
ggccgcctgtgtccgatcgagaccccggaaggcccgaacatcggcctgatcaactcgctg
gccacctacagccacaccaacagctacggcttcctcgagaccccgtatcgcaaggtggtg
gatcgccaggtcaccgacgaggtggtacacctctcggccatcgaggagggtgactacgtc
atcgcacaggcctcggccagcgtggacgaatctggcaagctggtcgacgacctggtgcag
gttcgccacaagggcgagaccaccttcatgcgtcccgagcaggtcaccctgatggacgtg
tctccgcgccaggtggtgtcggtggcggccgcgctgatcccgttcctcgagcacgacgac
gccaaccgcgccctgatgggctcgaacatgcagcgtcaggcggtgcccactctgcgcgcc
gagaagccgctggtcggcaccggcatggagcgtttcgtagcgcgtgactccggcgtctgc
gccgtggcgcgtcgtggtggcgtgatcgactcggtcgatgccaagcgcatcgtggtacgt
atcaacgaggacgagatcatcggcggcgaggctggcgtcgacatctacaacctcaccaag
tacgtgcgctccaaccagaacacctgtatgaaccagcgccccatcgtgcgtcctggcgac
gtggtcgagcgcggcgacatcctggccgacggtccctccgtcgacatgggcgacctggca
ctgggccagaacatgcgcatcgccttcatgccctggaacggctacaacttcgaggactcg
atcctgctctcggagcgcgtggtgcaagaagatcgcttcaccaccatccacatccaggag
ctgacctgtgtctcccgcgacaccaagctggggccggaggaaatcacctcggatatcccc
aacgtgggggagtcggcgctctccaagctggatgaggccggggtggtctacatcggtgcc
gaagtcggtccgggcgacatcctggtgggcaaggtcacgcccaagggcgagacccagctg
accccggaagagaagctgctgcgggcgatcttcggcgagaaggcctccgacgtgaaggat
acctcgctgcgtgcgccgaccggcatgaaaggtacggtcatcgacgtgcaggtgttcacc
cgcgacggcgtggagaaggattctcgtgcgcttgccatcgagcagatgcagctcgacgag
gtgcgcaaggacctccaggagacctaccgtatcgccgaggacgccactttcgagcgtctc
aagcgcacgctctccggccagccggtcaacggtggtcccaagttgaagaagggcgacgtg
ctctccgacagctacctggaagagttgccgcgccagcagtggttcaagctgcgcctgcag
gacgagtcgctcaacgaactgctggcccaggccgacgagcagctcgagaaccgtcgcaag
gagatggaagagcgtttcgaggacaagaagcgcaagctgacccagggcgacgacctggcg
ccgggcgtgctcaagatcgtcaaggtctacatggcggtcaagcgccgtatccagccgggt
gacaaaatggccggtcgtcacggtaacaagggtgtcatctcggcaatcatgccggtggaa
gacatgcccttcgacgacaacggggtgccggtcgacatcgtcctcaacccgctgggcgtg
ccatcgcgcatgaacgtcggtcagatcctcgagacccacctgggcctggcggcgcatggg
ctggggcagaagatcgataccctgctgcgtgatgcccgcagccagcagatggccgagatg
cgcgagttcctggggcaggtctacaactccaccacgggtacacgcgtcgaggacatcgac
tcgctcaccgacgacgaggtgatcgcgctggccaagaacctgcgcggtggcgtgccgatg
gcctcgccggtattcgatggtgcccaggagcacgagatcaagcagctgctgcgcctggcc
gacctgccggattccggccagatgaccctatatgacgggcgtaccggcgacgccttcgac
cgcccggtgacggtgggctatatgtacatgctgaagctcaaccacctggtggacgacaag
atgcacgctcgttccactggctcctactcgctcgtcacccagcagccgctgggcggcaag
gcgcagttcggcggccagcgtttcggcgagatggaggtgtgggcgctggaagcctacggc
gcggcctacacgctccaggagatgctcacggtgaagtccgacgacgtggaaggtcgcacc
aagatgtacaagagcattgtcgacggcgaccacaccatgcatgccggcatgccggaatcc
ttcaacgtactggtgaaggaaatccgttcgctgggcatcgatatcgagttagagagctag
DBGET
integrated database retrieval system
