Helicobacter typhlonius: BN2458_PEG0421
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Entry
BN2458_PEG0421 CDS
T04174
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hty
Helicobacter typhlonius
Pathway
hty03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN2458_PEG0421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hty03400
]
BN2458_PEG0421
DNA repair and recombination proteins [BR:
hty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN2458_PEG0421
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BN2458_PEG0421
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
Pho86
AAA_22
SWI2_SNF2
Kinesin
Microtub_bd
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CUU39307
UniProt:
A0A0S4PSP8
LinkDB
All DBs
Position
I:360544..362520
Genome browser
AA seq
658 aa
AA seq
DB search
MSNFILDSQYAPAGDQPQAIEHITQFIRNGAKYSTLVGVTGSGKTYTMANIIAKLNIPTL
IMTHNKTLAAQLYSEFKGFFPKNHIEYFISHFDYYQPEAYIPRRDLFIEKDSSINEDLER
LRLSATTSLLAYDDVIVIASVSANYGLGNPKEYLTMIEKLEVGATYTQKDLLLKLVDMGY
TRNDTIFERGHFRVNGEVIDIFPAYNENEFIRIEFFGDEIERIGVFDALERTALTQLESF
VLYAANQFIVSAQRLQEALHNIESELQMRLGEFESADKQIEYQRLKGRTEFDLEMIKESG
ICKGIENYARHLTGKKAGETPYSLLDYFEQKKKPYLIIVDESHVSLPQFGGMYAGDRSRK
EVLVEYGFRLPSALDNRPLRFDEFINKAPHFLFVSATPAQKELELSQKHIAEQIIRPTGL
LDPLYEVRDSDKAVLDLYDEIKARIAKNQRVLITTLTKKMAEELTKYYAELGIKVRYMHS
DIDAIERNHLIRSLRLGEFDVLIGINLLREGLDLPEVSLIAIMDADKEGFLRSETSLIQT
MGRAARNVEGKVILYAKKITGSMQRAFDITDYRRKKQEEFNQLHNITPTSVQRNVEQELK
IESSGLSKLYEKNAKKIPKSERNAIIKELSLKMHQAAKALEFEEAARIRDEIARIRNM
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattttattcttgattctcaatatgccccagcaggagaccagcctcaagccatc
gagcacattacacaatttattcgtaatggtgcaaaatacagcacacttgttggtgttaca
gggagtggaaaaacctacacgatggcaaatatcattgccaagctcaatatcccaacgctc
attatgacacacaataaaaccctagccgcacagctttatagcgagtttaaaggctttttt
cccaaaaaccatatagaatatttcatctcgcactttgattattaccagcctgaagcatat
atcccgcgccgagatttgtttatcgaaaaggattcaagcattaatgaagacttggagcga
ttaagattatccgccactacctcgcttttggcttatgatgatgtaatcgtaattgcaagt
gtgtcggcaaactatggtttagggaatcctaaagaatatctaacaatgatagaaaagctc
gaggtgggcgcgacatatacgcaaaaagacttacttttaaagcttgttgatatgggctat
acgcgcaatgacacaatttttgagcgggggcatttccgcgtaaatggcgaagtgattgat
atttttcctgcatataatgaaaatgaatttatccgtattgaattttttggtgatgagatt
gaacgcattggggtatttgacgcattagagcgcactgctcttacacaattagaatctttt
gtcctctatgcggcaaatcaatttatcgtaagcgcacaaagactccaagaagcccttcat
aatatagaatccgaattgcaaatgcgcttaggtgaatttgaaagcgcagacaaacaaatt
gaatatcaacgcttaaaggggcgcacagagtttgatttagaaatgataaaagaatctggc
atttgtaagggcattgaaaactatgcgcggcacttgacaggtaaaaaagcaggtgagaca
ccttactcacttttagattactttgagcaaaagaaaaagccttatttaattattgtcgat
gaatctcacgtgagtttgccgcaatttggtggtatgtatgcaggagataggagtcgtaaa
gaagtgcttgtagagtatggttttaggctacctagcgcacttgataatcgcccattgcgc
tttgatgaatttatcaataaagccccacattttctttttgtctctgcgactcctgctcaa
aaagaattagagctaagtcaaaaacatatcgcagaacagattatccgccccacaggattg
cttgacccactctatgaagtgcgagattctgataaagccgtgcttgatttatatgatgag
attaaagcaagaattgctaaaaatcaacgcgtgcttattactacgcttacaaaaaaaatg
gcggaggagcttaccaaatattatgccgagcttggcataaaggtgcgctatatgcacagc
gacattgatgctattgagcgcaatcatcttattcgctctttgcgattaggagaatttgat
gtgcttataggcatcaatctcttgcgtgaggggcttgacttacccgaagtgagccttatt
gccattatggacgcagataaagagggatttttacgctctgaaacaagccttatacaaaca
atggggagggcggcgcgtaatgtcgagggaaaagtaattttatatgcaaaaaaaatcaca
ggttcaatgcaaagagcatttgatattacagattatcgccgtaaaaagcaagaagaattt
aatcaactgcataatattacgcccacatcggtgcaaagaaatgtagagcaagagcttaaa
atagaatcaagcggactaagcaaactctatgaaaaaaatgccaagaagattccaaaaagt
gagcgcaatgcgattataaaagagttaagcctcaaaatgcaccaagccgctaaagcttta
gaatttgaagaagccgctagaatccgcgatgaaatcgctagaattcgcaatatgtag
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