Helicobacter typhlonius: BN2458_PEG0444
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Entry
BN2458_PEG0444 CDS
T04174
Name
(GenBank) FIG002344: Hydrolase (HAD superfamily)
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hty
Helicobacter typhlonius
Pathway
hty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN2458_PEG0444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hty03019
]
BN2458_PEG0444
Messenger RNA biogenesis [BR:
hty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN2458_PEG0444
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
TRI5
KH_2
dUTPase
FliD_N
Motif
Other DBs
NCBI-ProteinID:
CUU39330
UniProt:
A0A0S4PVS5
LinkDB
All DBs
Position
I:complement(386702..388231)
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AA seq
509 aa
AA seq
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MVGISVYIITRKVCNSHAQVVVEQAKAKAKAIEYETQKMLQNHHLAMKEEELHLKQSYKQ
ECAELAREYDCKLAKLDKLEQSKINQLNAQKAELDKQSKEVSELKTKVLRSQAELDKLKN
ETMQSKKEMLQILSKYTQMSKNEAKDILLAHLEEELCEQRAHLIRQYEREAHQEAKRKAN
YILAQATTRYAGEFANERLINVVNLPSDELKGRIIGKEGRNIKALELISGVDVIIDDTPG
SIILSSFNLYRRAIATKTIERLVEDGRIQPARIEEMYERVKNEMNEQIQQDGEDIAIDME
LGYMHPELKFLLGKMRYRASFGQNALGHSIEVAKLAAIIAGELGGDEKLARRAGILHDIG
KALTQELSGNHVELGAEVCTRYKEHPVVINAIKAHHGYEEIQSIECAAVCAADALSAARP
GARRDAVENFLKRMQDIERIAMDKVGVKQAYAINAGREVRVITRAELVNDEQSIVLARDI
AKDIESTLQYPGEIKVSVIRETRAVEYAR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
ttggtagggattagtgtatatatcattacaagaaaggtatgcaactctcacgctcaagtc
gtggtagaacaagctaaggcaaaagcaaaggcgattgaatacgagacgcaaaaaatgctc
caaaatcatcatctagcgatgaaagaagaggaacttcatctcaagcaaagctacaagcaa
gaatgtgcagaattagcacgagagtatgattgtaagttagctaaacttgacaaactcgag
caatcaaaaatcaatcagctcaatgcgcaaaaagcagagctagataaacagagcaaggaa
gtcagtgagctaaagacaaaggtattgcgctcacaggcggaacttgataagcttaaaaac
gaaacgatgcagagcaaaaaggagatgctacaaattctctcaaaatatacgcaaatgagt
aaaaatgaagcaaaagatattttactcgctcatctcgaggaggagttatgcgaacaaaga
gcgcaccttatccgccaatacgagagagaggcgcaccaagaggcaaagagaaaggcaaac
tatatcctagctcaagcgaccacgcgctatgcaggggaatttgcaaatgaacgactcatc
aatgtagtgaatctacctagcgatgagctaaaagggcggattatcggtaaagaggggcga
aacatcaaagccctagagcttattagcggcgtagatgtgattattgatgatacgcccggt
agcattattttgagtagttttaatctctatcgccgtgccattgcgacaaagaccatagaa
cgactcgtggaggatgggcggattcaacccgcacgaatcgaggaaatgtatgagcgtgtg
aaaaacgaaatgaacgagcagattcagcaagacggcgaggatattgcgattgatatggag
cttggctatatgcacccagagctaaaattcttgcttggcaaaatgcgctatcgtgcatcg
tttggacaaaatgcgctcgggcattctatcgaagtggcgaaactcgccgctattatcgcc
ggtgagctaggtggtgatgaaaaacttgctagacgcgcgggaatcttgcacgatattggc
aaagcactcacacaagaactaagtggcaatcacgtggagctaggtgctgaagtatgcaca
cgatacaaggaacaccctgttgttatcaacgctatcaaagcccatcacggctatgaggag
attcaaagtatagaatgcgccgcggtatgtgctgctgatgcgctatctgccgctcgtccg
ggcgcacgaagagatgcggtggaaaatttcttaaaaagaatgcaagatattgaacgcata
gctatggataaagtaggtgtgaaacaagcctatgccattaacgcagggcgcgaagtgcga
gtgattacacgcgcagaacttgtcaatgatgagcaaagtatcgttctcgcacgagatata
gctaaagatatagaatccaccctgcaatatccgggtgaaatcaaggtaagtgtgatacgc
gaaacccgcgcggtggaatatgcgagataa
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