Helicobacter typhlonius: BN2458_PEG0669
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Entry
BN2458_PEG0669 CDS
T04174
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hty
Helicobacter typhlonius
Pathway
hty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN2458_PEG0669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hty03021
]
BN2458_PEG0669
03019 Messenger RNA biogenesis [BR:
hty03019
]
BN2458_PEG0669
Transcription machinery [BR:
hty03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BN2458_PEG0669
Messenger RNA biogenesis [BR:
hty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BN2458_PEG0669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
ATPase_2
Spore_III_AA
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
CUU39555
UniProt:
A0A099UES1
LinkDB
All DBs
Position
I:complement(590937..592229)
Genome browser
AA seq
430 aa
AA seq
DB search
MADNKRTHTPVEGYQLDELRTKGIKQLIGIAEEVGVENPSDYRRQDLIFEILKAQVNQGG
YILFSGILEITNEGYGFLRALTESLADSQNDTYVSQSQIRRFALRNGDIVTGQVRPPKDQ
ERYYALLRIEAINYMSLEEIKNRPLFDNLTPLFPQTQLKLEYEQGKVTGRMLDLFSPIGK
GQRALIVAPPRTGKTELMKELAHGIAKNHPEVELMVLLVDERPEEVTDMERSVKGQVFSS
TFDMPATNHIRVADLVIESAKRKVEMGKDVVILLDSITRLARAYNAATPSSGKVLSGGVD
ANALHKPKRFFGAARNIEQGGSLTIIATALIETGSRMDEVIFEEFKGTGNSEIVLARSIA
DRRIYPAFDVLKSGTRKDDLLLGKDNLTKVWMLRNVMHTMDDIEALTFIYSKMKQTRDNE
EFLNMMNAQE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcagataataaacgaactcacacaccggttgaaggttatcaactcgatgaattacgc
acaaagggcataaagcagctcatcggcattgccgaggaagtaggagtagagaatcctagc
gactaccgcagacaggatttgatttttgagatattaaaagctcaagtcaatcaaggtggt
tacatactcttttcgggtattttggaaatcacaaacgagggttatggatttttacgcgca
ctgactgaaagcttagcagatagtcaaaatgatacttatgtgtcacaatcacaaatccgc
cgatttgccttgcgcaatggcgatattgtaaccgggcaggtgcgcccaccaaaagaccaa
gagcgctattatgccctattgagaatcgaggcaattaactatatgtcgcttgaggagatc
aagaatcgtccgctttttgataacctcactccgctttttccgcaaacacaacttaagctt
gaatacgagcaaggcaaggttaccggcagaatgctagatttgtttagtcctatcggcaaa
ggacagcgcgcacttattgttgctcctccgcgtacaggtaaaacggaactgatgaaagaa
cttgcccacggcattgcaaaaaatcacccagaagtggaacttatggtgcttctagtcgat
gagcgtccagaggaagttaccgatatggaacgcagtgtgaaggggcaggtctttagctcc
acatttgatatgccagcaacaaatcatattcgtgtagctgatctggtgatagaaagcgcg
aagcggaaggtggaaatgggtaaagatgtggtgatactccttgattctattacacgcctc
gctcgtgcatataatgctgctactccctcgagtggcaaggtgctaagcggaggtgtagat
gcaaatgccttacataagcccaaacgtttttttggtgcggcgcgtaatatcgagcaaggt
ggaagcctcacaattattgctactgcacttattgaaacgggctcgagaatggacgaagtc
atttttgaggagtttaagggcacaggtaatagtgaaattgtccttgcgcgttcaatcgct
gaccgcagaatctacccagcctttgatgtattaaagagtggcacacgcaaagatgattta
ctacttggcaaagataatcttacaaaagtgtggatgctccgcaatgtaatgcacacaatg
gacgacatagaagccctcacttttatctactccaaaatgaagcaaacacgcgataatgaa
gagtttttaaatatgatgaatgcacaggaataa
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