Helicobacter typhlonius: BN2458_PEG1111
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Entry
BN2458_PEG1111 CDS
T04174
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA/Rep, epsilon proteobacterial type 2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hty
Helicobacter typhlonius
Pathway
hty03420
Nucleotide excision repair
hty03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN2458_PEG1111
03430 Mismatch repair
BN2458_PEG1111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hty03400
]
BN2458_PEG1111
Enzymes [BR:
hty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN2458_PEG1111
DNA repair and recombination proteins [BR:
hty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN2458_PEG1111
MMR (mismatch excision repair)
Other MMR factors
BN2458_PEG1111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
NPH-II
Motif
Other DBs
NCBI-ProteinID:
CUU39996
UniProt:
A0A0S4PVH6
LinkDB
All DBs
Position
I:complement(993564..995285)
Genome browser
AA seq
573 aa
AA seq
DB search
MSATSTSIKLQKALDSLNLAQREAAKYADGAMLILAGAGSGKTKTITTRLAFLIDEVGIP
AENTLTLTFTNKAAAEMRERALALLEHNFNVPPLLCTFHKFGLIFLRFFIHTLGREANFV
VLDSDDKRAILKTLCDKKLQPAQCDYYISNMKNAALSPLEAFSYAHTDETKQMNRIYAEY
ERYLESKNLLDFDDLLYLTYKILSQDSNIAQKMSEQYQYIMVDEYQDTNEIQDKILKLLC
VAHNNLCVVGDDDQSIYGWRGADVRNILNFQKAFDEVKVVRLEENYRSSEQILNAANALI
AHNQNRLGKHLKSTKGTGADIRLIENDNESAEATFLAKDIAKLLAEGVNPSDIAILFRVN
ALSRSIEEGFNRARIPYKLIGAMRFYERAEIKDILSYLRLIVNPHDDYSFLRIINRPKRG
VGKVGQESLEKLALSKNLSCFATLETYPDQSTQALGKKAYESVMELVSHIKCWQNLNDLS
DLIESMQERIIFTFSKLDEVDRQGNIEEFYGMFGDYVIHNPTNTLVDFLNDLALASPTDE
VIGEAVSCMSVHMAKGLEFKYLYVIGLEEGFFL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctacatctacttctataaaacttcaaaaagccctagattcgctcaatctcgcc
caaagggaggcggctaaatacgctgatggtgcaatgcttattcttgcaggggctgggagc
ggtaagacaaagacaattaccacgcgccttgcctttctcattgatgaagtggggattccc
gcagaaaacaccctcacgcttacttttacaaataaagccgcagcagagatgagggagagg
gcgttagcacttttggagcataactttaatgtaccaccgcttctttgcacttttcacaaa
tttgggttgattttcttgcgtttttttatccacactttggggcgagaggcgaattttgtc
gtgcttgatagcgatgataaacgcgcaattttaaagactttgtgtgataaaaagcttcaa
cctgcgcaatgcgattattatatttcaaatatgaaaaatgctgctctctcacctttggaa
gcctttagctacgcgcatactgatgagacaaagcagatgaatagaatctacgcggaatac
gagcggtatttagagagtaagaatctgcttgattttgacgatttgctctatctcacttat
aagattctctcgcaagattcaaacatagcacaaaaaatgagcgaacaataccaatacatt
atggttgatgaataccaagatacaaatgaaattcaagataagattctaaaactgctttgt
gtggcgcataataatctttgtgtagtaggcgatgacgaccaaagcatttatgggtggcgt
ggggctgatgtgcgcaatatccttaattttcaaaaggcatttgatgaagtcaaggtagta
aggcttgaggagaattatcgcagtagtgagcaaattctaaatgccgcaaacgcgcttatt
gcgcataatcaaaatcgcttaggaaaacatctcaaaagcacaaagggcacgggtgcagat
ataaggcttatagaaaacgataatgaaagcgcggaggcgacatttctagctaaggatatt
gcaaaattactcgcagagggtgtgaatcctagcgatattgcgattttatttcgcgtaaat
gcgctttcaaggagcattgaagagggctttaatcgtgcgaggattccatacaaactcatc
ggtgcgatgagattttatgagcgtgcggagattaaggatatattgagctatttacgcctc
attgtgaatccacacgatgattattcatttttacgcattatcaatcgcccaaaaagaggc
gttggcaaggtaggacaagagagtttagagaaactagccttaagtaaaaatctctcctgc
tttgctacgcttgaaacttatccagaccaatccacacaagcactcggtaaaaaagcatat
gaaagtgtaatggagcttgtctcgcatatcaaatgttggcagaatttgaatgatttgagt
gatcttatagaatctatgcaagagcggattatttttacatttagtaagcttgatgaagtc
gatagacagggcaatattgaggaattttatggtatgtttggcgactatgttatacataat
ccaaccaacacccttgtggattttctcaatgatttagctttggcaagtcctaccgatgaa
gtcataggcgaggcggtgagctgtatgagtgtgcatatggcaaaaggtttagagtttaag
tatttatatgtgattggcttagaggagggttttttcctttga
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