Helicobacter typhlonius: BN2458_PEG1131
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Entry
BN2458_PEG1131 CDS
T04174
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hty
Helicobacter typhlonius
Brite
KEGG Orthology (KO) [BR:
hty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hty03032
]
BN2458_PEG1131
03400 DNA repair and recombination proteins [BR:
hty03400
]
BN2458_PEG1131
Enzymes [BR:
hty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BN2458_PEG1131
DNA replication proteins [BR:
hty03032
]
Prokaryotic type
DNA Topoisomerases
BN2458_PEG1131
DNA repair and recombination proteins [BR:
hty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BN2458_PEG1131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DNA_ligase_ZBD
DUF7575
zf_C2H2_13
Motif
Other DBs
NCBI-ProteinID:
CUU40016
UniProt:
A0A099UCP7
LinkDB
All DBs
Position
I:1014872..1017082
Genome browser
AA seq
736 aa
AA seq
DB search
MKDLIIVESPAKAKTIKNFLGNKYEVIASKGHIRDLPKHSFGIVVEEQHFQPQYNIDKDH
KEIVEKIQNASKKAKTTYIATDEDREGEAIGYHITQALNRPYDEFPRIVFHEITKNAITH
SLENPRVIDMDKVNAQQARRLLDRIVGFKLSQLMASKIQRGLSAGRVQSAALKILVDRER
EIQAFKPTIYYVVSAECNGIESELITYEKKLEKLSLQDSKKVEEMLTQIQSEQFYIQEIS
KKAKKSPTPPPFMTSTLQQSASSLLGYSPSRTMSIAQRLYEGVNTSFGTMGIITYMRTDS
LNIAKEAQEAARKLITQKYGKTYLPPKPKNYTTKSKSAQEAHEAIRPTNLDFTPELAKGF
LKPDEIKLYTLIYNRFLASQSQDAEFETQSIIFAAKGKKKIEFKASGRRLVFDGFYKILG
SDDKDKLLPPCTEGEDVVLKKLTSTKKSTEAPARYSEASIIKSMESLGIGRPSTYAPTIA
LLVAREYVNVEKKQLVPQESAFKVTSMLEAHFNEIVDSHFSAGLEDKLDDIAQKKIDWEV
MLWDFYEPFMKKIESGKKDIASQKVALPTGEMCPQCGKELVQRQSRYGMFVACSGYPKCK
YIKPQESAENDADSSPEDFGVCEKCGKPMVKKHGRNGEFIACSGYPKCKNTKSLQNKAAP
KSVEGVTCPECGGEIVQRFSRRGAFFGCKNYPKCTFISKFQPIAQKCEACGGAMCEREYR
KKQVRECLKCKTRVEI
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttaatcatcgtagaatcaccagcaaaagcaaaaacaatcaaaaatttttta
ggaaacaaatatgaagtgatagcctctaaggggcatatacgcgacttaccaaagcatagc
tttggcatagtagttgaagagcagcacttccagcctcaatacaatatagacaaagaccat
aaagagattgtagagaagattcagaatgcaagtaaaaaggcaaagactacatatatcgca
accgatgaggatagagagggagaggcgataggctatcacatcactcaagccctcaatcgc
ccttatgatgagtttccacgaatcgtatttcacgagattacaaaaaatgccattacccat
tctttagagaatcctcgcgtcattgatatggataaagtcaatgcgcaacaagcgcggcga
ttgcttgatagaatcgtaggctttaagctctcacaacttatggcgtctaagattcagcgg
ggactatcagctgggcgcgtgcagagcgcggcattgaagattcttgttgatagagagcgt
gagattcaagcctttaagcctacgatttattatgtggtaagcgcggagtgcaatggtata
gaatccgaacttatcacttatgagaaaaagctagaaaagctctctttgcaagattctaag
aaagtagaagaaatgcttacacagattcaaagtgagcaattctatatccaagaaattagc
aaaaaagccaaaaaatcccccacgcccccgccatttatgacttccacactgcagcaaagt
gcttcaagtttgctcggctactcgccaagccgcacgatgagtatcgctcaaaggctctat
gagggcgtgaatacaagctttgggactatggggattatcacatatatgcggacagatagc
cttaatattgctaaagaggctcaagaggctgcgcgaaagctcattacccaaaaatatggt
aaaacatatctgcctcctaaacctaaaaactacacgactaagtcaaaatctgcacaagag
gcgcacgaagccatacgcccgaccaatcttgacttcacaccagaacttgccaaaggcttc
ttgaagcccgatgagattaagctttatacgcttatttacaatcgcttccttgcctctcaa
agccaagatgcggagtttgaaactcaaagcattatctttgcggcaaaaggtaaaaagaaa
atagagtttaaagcaagtgggcggcgacttgtcttcgatgggttttataagattctaggt
agcgatgataaagataagcttttgccgccttgcacggagggcgaagatgttgtgttaaaa
aaactcacttcaacaaagaaatccaccgaagccccagcacgatacagcgaggcgagtatt
attaaaagtatggaatctttaggcattgggcgtcctagcacctatgcacctacaatcgcc
ctgctcgtagcgcgagaatatgtcaatgtagagaaaaagcagctcgtgccacaagagagt
gcctttaaggtaacaagtatgcttgaggcgcattttaatgagattgtagattcacatttt
agcgcgggacttgaagataagcttgatgatatagcccaaaaaaagattgattgggaggtt
atgctttgggatttttatgagccatttatgaaaaaaatagaatctggcaaaaaagatatt
gcctcccaaaaagtcgcactccccacaggcgaaatgtgtccgcaatgtggcaaggagctt
gtgcaaaggcaaagccgatatggtatgtttgtcgcgtgtagtggctatccaaaatgcaaa
tacattaaacctcaagaatcagcggaaaatgacgcggattcaagccctgaagattttggc
gtgtgcgaaaaatgtggcaaaccaatggtgaaaaagcacggcagaaatggcgaatttatc
gcgtgtagtggctatccaaaatgcaaaaacacaaagtcgctgcaaaataaagctgctcca
aaaagcgtagagggcgtgacttgtccggaatgcggaggggaaatcgtgcagcgatttagc
cgcagaggagcgttttttggctgtaagaattatcctaaatgcacctttatatcaaaattt
caacctatcgcgcaaaaatgcgaggcttgtggtggggcgatgtgtgagcgtgaataccgc
aaaaaacaagtgcgtgagtgccttaaatgcaaaacccgtgtggaaatataa
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