Helicobacter typhlonius: BN2458_PEG1612
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Entry
BN2458_PEG1612 CDS
T04174
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hty
Helicobacter typhlonius
Brite
KEGG Orthology (KO) [BR:
hty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hty03016
]
BN2458_PEG1612
Enzymes [BR:
hty01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BN2458_PEG1612
Transfer RNA biogenesis [BR:
hty03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BN2458_PEG1612
Prokaryotic type
BN2458_PEG1612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CUU40495
UniProt:
A0A0S4PVY2
LinkDB
All DBs
Position
I:complement(1456667..1457395)
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AA seq
242 aa
AA seq
DB search
MCRFKAVIAYDGSAFSGFALQKHRRSVLGELIESFARVGIGGEILGASRTDKGVHATAQV
ISFQNKHIHRYDTHFLRSLLNAKLYPHIMVRSLCEVDSHFHPRFDAKWRAYRFLLSPTRP
SPFASAYINYEKIGDMVRFHQALRLFKGTHNFVFFKKNGSYTKDDVRHIFDVRHYQRGGI
DVVYMRGNGFLRSQVRLMVGTALSVSRGEMSIENLQEQLLGKKRHYHYPISPQGLYLCGI
GY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagatttaaagcggtaattgcttatgatggaagtgcgtttagtggttttgctctc
caaaagcataggcgcagtgttttgggcgaattgatagaatcttttgcgcgtgtggggatt
ggcggggagattttgggggcttctcgcaccgacaaaggagtacacgccaccgcgcaggtg
attagctttcaaaacaagcatatccacagatacgatacgcattttttgcgctcacttctt
aatgcaaagctctatccgcatattatggtgcgctcattgtgcgaggtggattcacatttt
catccgcgctttgatgcgaagtggcgcgcgtatcgttttttgctctctcctactcgtcca
tcaccttttgcttcagcatatataaactatgaaaaaatcggcgatatggtgcgctttcat
caagccttaaggctttttaaaggcacacataattttgtattttttaagaaaaatggttca
tatacgaaagatgatgtgcgacatatttttgatgtgcgacattatcagcgcgggggcata
gatgtcgtgtatatgcgtggaaatggctttttgcgctcacaagtgcgcctaatggtgggc
acggctttgagcgtgagtaggggcgagatgagtattgagaatctacaggagcagctttta
ggcaaaaaacggcattatcattaccctattagtcctcaagggttgtatctttgtggcatt
gggtattaa
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integrated database retrieval system
