Helicobacter typhlonius: BN2458_PEG1861
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Entry
BN2458_PEG1861 CDS
T04174
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hty
Helicobacter typhlonius
Pathway
hty03030
DNA replication
hty03430
Mismatch repair
hty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN2458_PEG1861
03430 Mismatch repair
BN2458_PEG1861
03440 Homologous recombination
BN2458_PEG1861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hty03032
]
BN2458_PEG1861
03400 DNA repair and recombination proteins [BR:
hty03400
]
BN2458_PEG1861
Enzymes [BR:
hty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN2458_PEG1861
DNA replication proteins [BR:
hty03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN2458_PEG1861
DNA repair and recombination proteins [BR:
hty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN2458_PEG1861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
Motif
Other DBs
NCBI-ProteinID:
CUU40744
UniProt:
A0A099UB94
LinkDB
All DBs
Position
I:complement(1678295..1681945)
Genome browser
AA seq
1216 aa
AA seq
DB search
MSFTHLHLHTEYSLLDGANKIKFLAKRIRELGMESVAITDHGNMFGALDFYVSMKEEGLN
PIIGMEAYLHNGDTLGDKTIKQRFHLCLFAKNEIGYKNLMYLSSQSFIEGFYYYPRINKA
LLRERSEGLVCSSACLQGEINWQLNISNQRNVRFGAKGYEVAKEVALEYKDIFGEDFYLE
LMRHGINDQLFIDEQILKLGRELDIKVIATNDTHYSLQEDASAQEVAMCVAMGKTFNDKD
RLKHSVKEFYVKSPQEMQKLFCDVPEVLENTQEIAQKCRLDLDLKNIEIKNKHTGEILLK
NTPATPPTFKHTTNYALKENLPQILNCSLESIDDAVYFAFKCRQGLEERLKHIPTESHPM
YKKRLEHEIEVINSMKFPGYMLIVWDFVNFAKQNNIPVGPGRGSAAGSLVAYSLKITNID
PLKYDLLFERFLNPERVSMPDIDMDFCQRRRGEMIEYVANTYGKFNVAQVITFGSLLAKG
VIRDVARVLNMPYNDADAFAKLIPAELGITLTKHIGKDGKEKDGAWEKESRIKELVEKSP
LAKQVWDYALLLEGLKRNAGTHAAAIVIDSQEELWHKVPLYTNDKMNGVATQYSMNWLEP
VDLIKFDFLGLKTLTVIDDAINLIKKRYEKEIDFSTMEMDDYKVYETIQSGNTLGLFQIE
SEGMQAIAKRLKPSNFEDVVAMISLYRPGPMDLIDDFIARKHGLVKIEYLIDALEPILKP
TYGVIVYQEQVMQIVQTIGGFSLGGADLVRRAMGKKKLDEMLRLKKEFADGAQKQGYNRA
KAEDLWELIVKFAGYGFNKSHAAAYGMITYQTAFLKTYYEHEFMAAMLTSETNKIESIAK
YIDEVKSLGIEIVPPHVNISENNFGVGEFDGVKKIIFGLSAIKGLGDAPIENIIQEREKN
GAYKSLEDFIARVDFSKLTKRSLEPLIKSGGLDNLGYSRKSMLEYIDILCDKGREKTKAQ
EMVHNSLFGEGEVEINIYLPITHKGEYDIRTLLDYEYECMGIYISGHPLDDFKEQIQKIK
GMAKSMDLEELKVDSTCMLVGKILNIKRRISKKSGKPFGTIDFLDYGGKVEITVFEKHLE
TLENLDLQEPLALKCKIEEREESSSFRILKIFTLEEAAKEKMRVEFKASNIEEEEIVPID
MKPTEIDTCTPLCLVLDSSCVASGILDRIKEHSQNVRGERELHLRIKSDNFGYTFVSNLK
VHSSIKHTLNELEWCE
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagctttacacatcttcatcttcataccgaatactccttacttgatggcgcaaataaa
attaaattcctagctaaacgcattcgtgaattaggtatggaatctgttgcgattactgac
cacggcaatatgtttggtgcgcttgatttttatgtaagtatgaaagaagaggggcttaat
cccattatcggtatggaagcctatctgcataatggcgatacactcggtgataaaacaatc
aaacagcgattccatctctgcctctttgccaaaaatgaaataggctataagaatctaatg
tatctctcctcacaatcttttattgagggattttattactatcctcgtattaacaaagct
ttactaagagagaggagtgaagggcttgtttgctcttcagcttgtttgcaaggcgagata
aattggcagcttaatatcagcaatcaacgcaatgtgcgatttggagcaaaaggttatgaa
gtagccaaagaagtagcattagaatacaaagatatttttggtgaagatttttaccttgag
cttatgcgacacggcattaacgaccagcttttcattgatgagcagattctaaagcttggc
agagagcttgatattaaagtgattgcgacaaatgatacgcattattctttgcaagaagat
gcaagtgcgcaagaagtagcaatgtgtgtggcaatgggtaaaacatttaacgacaaagat
agactaaaacattcagttaaagaattttatgttaaatccccgcaggagatgcaaaagctc
ttttgtgatgtgcctgaagtgctagaaaatacgcaagaaattgcgcaaaaatgccgactt
gatttagatttgaaaaatattgagattaaaaacaaacatacaggtgagatactattaaaa
aatactccagcaacccctcctacttttaaacataccacaaattatgcactcaaagaaaat
ttgccacagattcttaattgctctttagaatctattgatgatgcagtgtatttcgccttt
aaatgtcgtcaagggctagaggagcgacttaaacatatccccacagaatctcaccctatg
tataaaaaacgtctagaacacgagatagaagtgattaattcaatgaaatttcccggctat
atgctcattgtgtgggattttgtcaattttgcaaaacaaaataatatccccgtgggaccc
ggacgtggttcagcagcaggcagtctcgtagcgtattcacttaagattacaaatattgac
ccgcttaaatatgatttactttttgagcgatttttgaatcccgagcgggtaagtatgccc
gatattgatatggatttttgccaacgcagacgcggcgagatgatagaatatgtagcaaat
acttatggcaagtttaatgtcgcacaagttattacctttggttcgctccttgcaaaaggt
gtgatacgagatgtcgcacgtgtgcttaatatgccctataatgatgccgatgcttttgca
aaacttatcccagcagagcttggtatcacccttacaaaacacataggtaaagatggtaaa
gaaaaagatggtgcgtgggaaaaagagtcgaggattaaagaacttgtagagaaaagtcct
ttagcaaaacaagtatgggattatgccttgttgcttgaaggattaaaacgcaatgccggc
acacacgctgcagctattgtaatagattcccaagaagagctatggcacaaagtccctctt
tatacaaatgataaaatgaatggtgtcgctacgcagtattctatgaattggcttgagcct
gtggatttaattaaatttgactttttaggacttaaaacgctcactgtaattgatgatgca
attaatcttattaaaaagcgatacgaaaaagaaattgactttagcacaatggaaatggac
gattacaaagtctatgaaacaatccaaagtggcaatacgctcggattattccaaatagaa
tctgaaggtatgcaggcaatagcaaaaaggctcaaaccaagcaattttgaagatgtggtg
gcaatgatttccctctatcgtcccggacctatggatcttattgatgattttatcgctcgt
aagcacggattagtaaaaattgaatatctcatagacgcgctagagccgattttaaagccc
acttatggcgtgattgtctatcaagagcaagtaatgcagattgtgcaaactattggtgga
ttctctcttggcggagcagatttagtgcgccgtgctatgggaaaaaagaagcttgatgaa
atgttgagattaaaaaaggaatttgctgatggcgcgcaaaaacaaggctataatcgcgct
aaagcagaggatttatgggaacttattgtgaagtttgccggctatggattcaataaatct
cacgctgcagcctatggaatgattacctatcaaaccgcatttttaaaaacatattatgag
cacgaatttatggcagctatgctcacaagtgagacaaataaaatagaatctatagcaaaa
tacattgatgaggtaaaatctcttggtattgagattgtgcctccacatgtaaatatctct
gaaaacaattttggtgtgggtgaatttgatggagtgaaaaaaatcatttttggactaagc
gccattaaagggctaggcgatgcacctattgaaaatatcatacaagagcgtgaaaaaaat
ggtgcatacaagagtttggaagatttcatcgcgagagtagatttttctaagctcacaaaa
cgttctttagagccacttattaaatccggaggattggataatctaggctactcgcgtaaa
agtatgcttgaatatatagatatactctgtgataaagggcgagaaaaaactaaagcgcaa
gagatggtgcataactcactctttggtgagggtgaagtagagattaatatatatttgcct
atcactcataaaggtgaatatgatatacgcactttgcttgattatgagtatgaatgtatg
ggaatctatatatcgggacatcctcttgatgactttaaggaacagatacaaaagattaag
ggtatggctaagagtatggatttggaagaattaaaggtagattctacttgtatgcttgtg
ggaaaaatattgaatattaagcgtaggattagcaaaaaaagtggcaaaccttttggcaca
atcgacttcttagattatggtgggaaagttgaaataacggtatttgaaaaacaccttgaa
acacttgaaaatcttgatttgcaagaacctttagcattaaaatgtaaaatagaggaaagg
gaagaaagctcaagttttagaatcttaaaaatttttacactcgaagaagcagcaaaagaa
aagatgcgcgtagaatttaaagcctcgaatatagaagaggaagagattgtccccattgat
atgaagcctactgaaattgatacctgcacgcctttatgccttgtgctggattcaagctgt
gtggcaagtggcattttggatagaatcaaggaacattcgcaaaatgttaggggtgagcgt
gagctgcatttaagaattaagagcgataattttggttatacttttgtgagcaatcttaag
gtgcattcgagtattaaacatacattgaatgaacttgaatggtgcgaatag
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integrated database retrieval system
