Humibacter sp. BT305: DVJ78_00235
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Entry
DVJ78_00235 CDS
T05558
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hum
Humibacter sp. BT305
Pathway
hum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DVJ78_00235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hum02000
]
DVJ78_00235
Transporters [BR:
hum02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DVJ78_00235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AXH34073
LinkDB
All DBs
Position
60198..61859
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AA seq
553 aa
AA seq
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MHRTPFRRTTAVASAAALTAAALLLAGCTASGGGAGSTPAGEPKEGGTLVYASGDAEPTC
LDPHVGGNYPQALVATQYLEQLVTLDAEGNPVPWLADSWTVSDDGLTWDITVRSGVEFTD
GTPLTSEAIAANVAHLQDPNTGSSTGYLAVQKIQSVEIVDDSTARLHLSSPDSALLESFS
QPWLAIESPTALKRSKDENCASPVGTGPFVVSQWNRQQSIELDRNDAYASAPADATYTGP
AHLEHIEWRFIPEAATRYAALASGEVDVIDNAQPDAIQQAEGNGSLVHLDAPRPGSSNRI
ELNSGQAPFDDEKVREAFIAAADVNPGIQSLFFGTAQRSYSPLSSVEPTAYSEPDLFDVD
TDRANQLLDEAGWSARDSDGIRTKDGQRLTLRMPVSTNQSIPAEVSLFEQLQAAEKAVGF
DIQLDQLDLSSWYGALAANEYELVSAPYTKVGPDVLRILYDSSGITPAPSGYFANHAKVD
DPALDALLAQASATSDPAQRADLYQQAQRIVLEGYYILPLYDQQNHFLLRNDVEGVRTLA
VSTPTFAEAWLDR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgaacacccttcagacggacgaccgcggtcgcgagcgccgccgccctcaccgcc
gcggccctgctgctcgcgggatgcaccgcctccggcggtggcgccgggagcaccccggcc
ggcgagccgaaggagggcgggaccctcgtctacgcctcgggcgacgccgagccgacctgc
ctcgacccgcacgtgggcggcaactacccgcaggccctcgtcgccacgcagtacctcgag
cagctcgtcaccctcgacgccgagggaaaccccgtcccgtggctcgccgacagctggacg
gtcagcgacgacgggctcacctgggacatcacggtgcgcagcggcgtcgagttcaccgac
gggacgccgctgacgtctgaggcgatcgcggcgaacgtggcgcacctgcaggacccgaac
accggatcgagcaccgggtacctggccgtgcagaagatccagagcgtcgagatcgtcgac
gacagcacagcgcgtctgcacctcagctcgcccgactcggcgctcctcgagtcgttcagc
cagccgtggctcgccatcgagtcgcccacggcgctgaagcgcagcaaggacgagaactgc
gcctcccccgtcggcacgggcccgttcgtcgtcagccagtggaaccgccagcagtcgatc
gagctcgaccgcaacgacgcctacgccagcgccccggccgatgcgacgtacaccggtccg
gcccacctcgagcacatcgagtggcgcttcatccccgaggccgccacccgctacgcggcg
ctcgccagcggcgaggtcgacgtgatcgacaacgctcagccggatgcgatccagcaggcc
gagggcaacggatcgctcgtgcacctggacgccccccgccccggatcgagcaaccgcatc
gagctcaactccggtcaggcccccttcgacgacgagaaggtgcgcgaggcgttcatcgcc
gccgcggacgtgaaccccggcatccagagcctgttcttcggcacagcgcagcgctcctac
tcgccgctgtcgagcgtcgagcccaccgcgtacagcgagccggacctcttcgacgtcgac
acggatcgcgcgaaccagctgctggacgaggcgggctggagcgcgcgcgactccgacggc
atccggacgaaggacggccagcgcctcaccctgcggatgcccgtgagcaccaaccagtcg
atccccgccgaggtgtcgctcttcgagcagctgcaggccgccgagaaggcggtcggcttc
gacatccagctcgaccagctcgacctctcgagctggtacggcgcgctcgccgcgaacgag
tacgagctcgtctcggcgccctacacgaaggtcggccccgacgtgctgcgcatcctctac
gactcgtcgggcatcacgcccgcgccgagcgggtacttcgcaaaccacgcgaaggtcgac
gacccggccctggacgcgctgctcgcccaggcgagcgccacgagcgaccccgcccagcgc
gcggacctctaccagcaggcgcagaggatcgtgctggaggggtactacatcctgccgctc
tacgatcagcagaaccacttcctgctgaggaacgacgtggagggggtgcgcacgctcgcc
gtgtcgacgccgacgttcgccgaggcgtggctggaccgctga
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