Humibacter sp. BT305: DVJ78_00350
Help
Entry
DVJ78_00350 CDS
T05558
Name
(GenBank) alpha-L-rhamnosidase
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
hum
Humibacter sp. BT305
Pathway
hum00946
Degradation of flavonoids
hum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
DVJ78_00350
Enzymes [BR:
hum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
DVJ78_00350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Bac_rhamnosid_C
Motif
Other DBs
NCBI-ProteinID:
AXH34092
LinkDB
All DBs
Position
complement(87887..90733)
Genome browser
AA seq
948 aa
AA seq
DB search
MSTVTISTLRVGRRRDRPVTADARPPVSWTVDAEPGWVQSAARLRLDGERIAELEGEGCV
LVAWPFEPLQGRRVHTLELQVVGDDGSASDWSAPVTFSVVRRTEPWTAPSIGLAHPDRPA
QPVYLRREFDVEPTVVAATLDATAHGVYQVAIDGVDVDDHVLKPGWTSYRHRLALESTDV
SALLRPGRRQALTVRMAGGWFTERYGFGSSARRVYGDQPAVSIELRLEHSDGRVESLRSD
ERWRASSAVELESSGLYAGETRDARRHQEGWDAPGFDDGAWEPVAVVPLQPSLAVEALDV
EPVRRIEERPPLAVLTTPSGATVLDFGQNLVGRVRFTVEGPRGATVTLRHAEVLEQGELC
VRALRAAESIDRFTLAGRGPVVMEPEFTFHGFRYVEVSGWPGELRPEAFRAVVLHTDLDR
TGGFGCSDHRLERLHDNVVWSLRGNAVGLPTDCPQRDERMGWTGDAQVFAPAAASLFGVD
AFLATWLDDLALEQGDRAGLVPTIIPDVLGELSDVAAAGWGDAATVVPTVLHERYGDVAL
LRRCLPSMRAWVDRAHREAGPSRLWETGFQYGDWLDPIASRPDKAATDPGLVATAYLYRS
TRLLADAYRAVAEAEPGGAGEHDGEDLVAAQRGYAALAEEVRQAFRHVYLTPAGRLMSDA
PTAYALTLAFGLVDDEPTVRRLGERLAFLLRARGYRMATGFLGTPVVLDALLDSGRSAAA
EQLLLQDACPSWLYPVTMGATTMWERWDSMLPDGSINPSGMTSFNHYALGSVADVLHRRV
GGLAPAAPGYRRVRIRPWLVSALDHARVHQETPYGRAAVSWRRSGGSVTVVAELPAGVTA
SVELPDRPAFETGSGRHEWVVDEPRSSTQAPALGVDADLADLADRPGVCALVSRRLAGAD
PELGREFDEFVRWVPGRTLRAELAAVSPPPELVASLDAELRTLTAPAS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagtgacgatctcgacgctgcgcgtcggacggcgtcgagaccggccggtgacc
gcggacgctcggccgcctgtgtcctggacggtcgacgcggaacccggctgggtgcagtcg
gcggcgcgtctccgactcgacggcgagcgcatcgcggagctcgagggtgaggggtgcgtg
ctcgtggcctggccgttcgagcccctccaggggcgacgcgtccacacgctggagctccag
gtcgtcggggacgacggcagcgcgtccgactggagcgcgccggtgaccttctcggtcgtg
cgccgcacggagccgtggaccgccccgtcgatcggtctcgcgcatccggaccggcccgcc
cagccggtctacctgcgtcgtgagttcgacgtcgagccgaccgtcgtcgcggcgacgctc
gacgcgaccgcccacggcgtctaccaggtcgcgatcgacggcgtcgacgtcgacgaccat
gtgctgaagcccggctggacctcctaccgccatcggctggctctggagagcacggacgtg
tccgcgctgctccgccccggtcgtcgccaggctctcacggtgcgcatggcgggcggatgg
ttcaccgagcgatacggattcggttcctcggcccgacgggtctacggcgaccagccggcg
gtgtcgatcgagctccggctcgagcactccgacggtcgcgtcgagtccctcaggagcgac
gagcgctggcgcgcctcctccgcggtcgagctggagagcagcggcctctacgcgggcgag
acccgcgacgcccgtcgacaccaggagggctgggacgcgccgggattcgacgacggagca
tgggagcccgtcgcagtggtcccgctgcagccctccctcgcggtcgaggccctcgacgtc
gagcctgtccggcggatcgaggagcgcccgcccctggcggtgctcacgacgccctccggt
gcgacggtgctcgacttcgggcagaacctcgtcgggcgggtccgcttcacggtcgagggt
ccgcgaggggcgacggtcaccctccgccatgccgaggtcctcgagcagggcgagctgtgc
gtgcgcgcgctgcgggcggccgagtcgatcgatcgcttcaccctcgccggtcgaggcccg
gtggtgatggagcccgagttcaccttccacggcttccggtacgtcgaggtgagcggatgg
ccgggagagctccgccccgaggccttcagggccgtcgtcctccacaccgacctcgaccgc
acgggcggcttcggctgctccgatcaccgtctcgagcggttgcacgacaacgtcgtgtgg
agcctgcggggcaacgcggtgggcctgcccaccgactgcccgcaacgggacgagcggatg
ggatggacgggagacgcccaggtcttcgcgcccgccgccgcatccctgttcggcgtcgac
gccttcctcgccacctggctcgacgacctggctctcgagcagggcgaccgtgccggactc
gtccccacgatcatcccggacgtgctcggcgagctcagcgacgtggcggccgcgggatgg
ggcgacgccgccacggtcgtgccgacggtcctccacgagagatacggcgatgtcgcgctg
ctcagacggtgtctgccgagcatgagggcgtgggtcgatcgagcccaccgcgaggcggga
ccgtcgcggctatgggagacgggattccagtacggcgactggctcgaccccatcgcatcc
agacccgacaaggcggcgacggaccccggactggtggcgaccgcctacctctaccgctcg
accaggcttctcgccgacgcgtaccgggcggtcgccgaggcggagcccggcggcgcgggg
gagcacgacggcgaggatctcgtggcggcgcagcgcgggtacgcggcgctcgcggaggag
gtgcggcaggccttccggcacgtgtacctcacgccggccggacggctgatgtcggatgcg
ccgaccgcctacgcgctcaccctcgcgttcgggctcgtcgacgacgaaccgaccgtgcgg
cgcctcggcgaacggctcgccttcctcctccgggctcgcgggtaccggatggcgaccggg
ttcctcgggaccccggtcgtgctcgacgccctcctcgacagcggccgatccgcggccgcg
gagcagctcctgctgcaggacgcgtgtccgtcctggctctaccccgtgacgatgggcgcg
accacgatgtgggagcgctgggactcgatgctgccggacggctcgatcaacccctcgggg
atgacgtcgttcaaccactacgcgctgggctcggtggccgacgtgctgcaccggcgcgtg
gggggtctcgccccggccgcgcccggctatcgccgtgtgcgcatccggccctggctcgtc
agcgccctcgatcacgcccgggtgcaccaggagaccccgtacggccgtgcggcggtgagc
tggcgccggtccgggggatcggtcacggtggtcgcggagctgccagcgggcgtgaccgcc
tcagtcgagctgccggaccggccggcgttcgagaccggctcagggcggcacgagtgggtc
gtcgacgaaccacgctcgtcgacgcaggctcctgccctcggggtcgatgccgacctcgcc
gatctcgccgaccgaccgggggtgtgcgctctcgtctcgcgacggctcgccggcgccgat
ccggagctcggccgtgagttcgacgagttcgtgcgctgggtgccgggtcgcacgctgcgg
gcggagctcgccgccgtgtcgcctccgccggagctcgtggcgtcgctcgacgcggagctg
cgcacgctcaccgctcccgcgagctga
DBGET
integrated database retrieval system