Humibacter sp. BT305: DVJ78_00840
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Entry
DVJ78_00840 CDS
T05558
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
hum
Humibacter sp. BT305
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hum03400
]
DVJ78_00840
Enzymes [BR:
hum01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
DVJ78_00840
DNA repair and recombination proteins [BR:
hum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
DVJ78_00840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AXH34176
LinkDB
All DBs
Position
complement(183736..185214)
Genome browser
AA seq
492 aa
AA seq
DB search
MTTSPPRTRWLFAGQLGPLFDDGGPILLVEARSVFGRRPMHRAKAHLILSAIRHRAAELG
DRVEYQRVERYSEVVNGRDDLEVVDPTSYSARRFVRRRGITVLPSRGFVTSEEDFRGWAD
ARGGRRLLMEDFYRSVRERTGVLMRGDQPEGGRWNLDHDNRQPPPKGAARLGLPDPWWPE
EDAIDEEVRADLDRWQAEGVVRLVGDDGPRRFAATAAEAERALHDFVESRLGDFGPFEDA
MLDGDWTMAHSLLSPALNLGLLDPRDVVETVAAEYHAGRAPLASVEGFVRQIAGWRDYVW
HLYWYLGEGYRTSNNALDARRPLPQVFRELDPSEIESRCLSETIEGMRRHGWAHHIQRLM
VLGNWALQHAYGPVALNDWFVDMFVDGTPWVMPANVIGMSQHADGGIVATKPYAAGGAYI
DRMSDYCGSCRFDPKVRLGEDACPFTAGYWAFLDRVEPRLRGNHRMAQPLAGLRRLADRE
AVVAQEAHRDRW
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctccccgccccgcacgcgctggctgttcgccggtcagctggggccgctcttc
gacgacggtggcccgatcctgctggtcgaggcacggtcggtcttcggtcgtcgtccgatg
caccgagccaaggcgcacctgatcctgtcggcgatccggcaccgcgcggccgagctcggg
gaccgcgtcgagtaccagcgtgtggagcggtacagcgaggtggtcaacggtcgcgacgac
ctcgaggtcgtcgatccgacgtcgtactccgcgcgccgcttcgtgcggcggcgagggatc
accgtgctcccgagccgcgggttcgtcacgtcggaggaggacttccggggctgggcggac
gcgcgcggcgggcggcgcctcctgatggaggacttctaccgcagcgtccgcgagcggacc
ggagtgctcatgcgcggcgaccagcccgagggtggccgctggaacctcgaccacgataac
cggcagccgccgccgaaaggtgcggcgcgcctcggactgcccgacccgtggtggccggag
gaggacgcgatcgacgaggaggtgcgcgccgacctcgatcgatggcaggcggagggcgtc
gtgcggctcgtcggcgatgacggcccccgtcgcttcgctgccacggcggcggaggcggag
cgcgctctccacgacttcgtcgagtcccggctcggcgacttcggtccgttcgaggatgcg
atgctcgacggcgactggacgatggcccactcgctgctcagccccgccctcaacctcggc
ctgctcgacccccgcgacgtcgtcgagacggtcgcggccgagtaccacgccggacgggcg
cctctggcgagcgtcgagggcttcgtgcgacagatcgccggatggcgcgactacgtctgg
cacctgtactggtacctgggggaggggtaccgcacctcgaacaacgccctcgatgcccgg
cgaccgctgccgcaggtcttccgcgagctcgacccgtcggagatcgagtcgcgctgcctc
agcgagacgatcgaggggatgcgccgccacggctgggcgcaccacatccagaggctcatg
gtgctcggcaactgggcccttcagcacgcctacggcccggtggcgctgaacgactggttc
gtcgacatgttcgtcgacggcaccccgtgggtgatgcccgcgaacgtgatcggcatgtcg
cagcacgccgacggcggcatcgtcgccacgaagccctatgcagcgggtggcgcctacatc
gaccggatgtcggactactgcggatcctgccgcttcgacccgaaggtgcggctgggcgag
gacgcctgtccgttcaccgccgggtactgggcgttcctcgatcgggtcgagccgcgcctc
cgcgggaaccaccggatggcgcagcccctcgccggactgcgccggctcgccgaccgggaa
gccgtcgtcgcccaggaggcccatcgtgaccgctggtga
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