Humibacter sp. BT305: DVJ78_02410
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Entry
DVJ78_02410 CDS
T05558
Name
(GenBank) penicillin-binding protein 2
KO
K05364
penicillin-binding protein A
Organism
hum
Humibacter sp. BT305
Pathway
hum00550
Peptidoglycan biosynthesis
hum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DVJ78_02410
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hum01011
]
DVJ78_02410
Peptidoglycan biosynthesis and degradation proteins [BR:
hum01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DVJ78_02410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AXH34423
LinkDB
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Position
499697..501151
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AA seq
484 aa
AA seq
DB search
MTRELKRVSIVVVLMFVTLFVSSTTIQFFQASNLADNPRNARTIYASYDVQRGSILVQGQ
PIAESVPSGDEYKYQRVYTNGPLYSAVTGYYTLGQGSTGIEQSLNDYLSGTSSSQFLDYL
NRIITGQNPQGASVSLTIDPVAQQAAYDALGDLQGAVVAIEPSTGRILAMVSKPDYDPNA
LAVHDTKAVDDTYQQLLQAAGDPLINKTIDDLNPPGSTFKIVTTAAALQNAGLPVDHTLE
NTARYQLPGSDQTVSNAGGGTCGGGDQVSIATAFILSCNIPMAELGVEMGDKDLGDMANA
FGFGKELTVPMDVAASQFPSTAGDDAQLALQSFGQGSDVATPLQIAMLSAGVANGGKIMT
PNLVDSINAPDLSSLQSFQPKEFATPMTSDTASTISQLMVEAVQSGAATNARIDGTSVAG
KTGTAENGDGDPYTLWFTGYAPADNPRIAVAVVVENGGGQGQSGTGNSLAAPIAKQVLEA
VLNK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacccgagaactcaaacgcgtgagcatcgtggtcgtgctgatgttcgtcacgctcttc
gtgtcgagcaccaccatccagttcttccaggcctcgaacctcgccgacaacccgcggaac
gcccggacgatctacgccagctacgacgtccagcgcggatccatcctggtgcagggccag
ccgatcgccgagtccgtgccgagcggcgacgagtacaagtaccagcgcgtctacaccaac
ggtccgctctacagtgcggtcaccggctactacacgctcggccaggggtcgaccggcatc
gagcagtccctgaacgactacctcagcggaacctcgagctcccagttcctcgactacctc
aaccgcatcatcaccggccagaacccgcagggcgcctccgtctcgctcaccatcgacccg
gtggcccagcaggcggcctacgacgccctcggcgacctccagggagcggtggtcgcgatc
gagccgtcgaccgggcgcatcctcgccatggtctccaagcccgactacgacccgaacgcc
ctggcggtccacgacaccaaggccgtcgacgacacctaccagcagctgctccaggccgcc
ggcgatccgctcatcaacaagacgatcgacgacctcaacccgcccgggtccacgttcaag
atcgtcaccaccgccgcggcgctccagaacgcgggcctgcccgtcgaccacaccctcgag
aacaccgcccgctaccagctgcccggatccgaccagacggtctcgaacgccggcggcggc
acctgcggcggcggcgaccaggtcagcatcgcgaccgccttcatcctgtcgtgcaacatc
ccgatggccgagctcggcgtggagatgggcgacaaggacctcggcgacatggcgaacgcg
ttcggcttcggcaaggagctcaccgtcccgatggatgtcgcggcgagccagttcccgagc
accgcgggcgacgacgcccagctcgccctgcagtccttcggccagggcagcgacgtcgcc
accccgctgcagatcgcgatgctctcggccggcgtcgcgaacggcgggaagatcatgacc
ccgaacctcgtcgactcgatcaacgctcccgacctgagcagcctccagagcttccagccg
aaggagttcgccaccccgatgacgagcgacaccgcgtcgacgatctctcaactgatggtc
gaggcggtccagtccggagcggcgactaatgcaagaatagacgggaccagtgtggccggt
aagacggggaccgcggagaacggggacggcgatccctacacgctgtggttcaccggatac
gcgcctgccgacaatcctcggatcgccgtggcggtcgtggtggagaacggcggcgggcaa
gggcagtccggcacgggcaacagcctggccgcgccgatcgcgaaacaagtactagaggcg
gtgctgaataaatga
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