Humibacter sp. BT305: DVJ78_04830
Help
Entry
DVJ78_04830 CDS
T05558
Name
(GenBank) sugar ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
hum
Humibacter sp. BT305
Pathway
hum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DVJ78_04830
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
DVJ78_04830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hum02000
]
DVJ78_04830
Transporters [BR:
hum02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
DVJ78_04830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
ALN_composite
Motif
Other DBs
NCBI-ProteinID:
AXH34824
LinkDB
All DBs
Position
complement(1004696..1005667)
Genome browser
AA seq
323 aa
AA seq
DB search
MKRLAMAALAAVAAVSLAACSSGGDAGSTSGGGSADKTLGIVAYIGTNAINQQAIRGATE
VAEKNGWTVNVVDTQGNADQANAAMSSFATQGVGGILTLVYASTALGAGLASAQAAGVPV
ASWGGGLADGVIATTSNEAVGKASAEALVKDMGDSGDLLALTFHPGKLCLDHQNEFDAAV
AEKPGLNITYNEVVVPGQQQSAANFTTSWLASHPAGQGNYGIWTCWDEPMEGIISALDQA
GRTDVKTFSTNGSAPGILDVQEGKVTSVVWQPSEDEGAALAQAILDYRANPDGWDPQTIK
IDGVVVDSSNVEQFIKDHPDSIK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattggcaatggcggccctggcggccgtggcggctgtgagtctcgccgcctgt
tcctccggcggcgacgccggctccacctccggcggcggctccgccgacaagaccctcggc
atcgtggcctacatcggcacgaacgccatcaaccagcaggccatccgcggcgccaccgag
gtggccgagaagaacggctggaccgtcaacgtggtcgacacgcagggcaacgccgaccag
gcgaacgccgccatgtcgagcttcgccacgcagggcgtcggcggcatcctcaccctcgtg
tacgcctcgaccgccctcggcgccggactggcgtcggcgcaggcggcaggagtgccggtg
gccagctggggcggcggcctcgccgacggcgtgatcgccaccaccagcaacgaggcggtc
ggcaaggcgtcggccgaggcgctggtcaaggacatgggcgactcgggcgacctgctcgcg
ctcaccttccaccccggcaagctgtgcctcgaccaccagaacgagttcgacgccgccgtc
gccgagaagcccggcctgaacatcacctacaacgaggtcgtcgtccccggccagcagcag
tcggcagcgaacttcacgacgtcgtggctggccagccaccccgccggccagggcaactac
ggcatctggacgtgctgggacgagccgatggagggcatcatctccgccctcgaccaggcg
ggccggaccgacgtcaagacgttctccaccaacggcagcgcgcccggcatcctcgacgtg
caggaggggaaggtcacctcggtggtctggcagccgagcgaggacgagggcgctgccctc
gcccaggcgatcctcgactaccgggcgaaccccgacggctgggatccgcagaccatcaag
atcgacggcgtcgtcgtcgactcgagcaacgtcgagcagttcatcaaggaccacccggac
tccatcaagtag
DBGET
integrated database retrieval system
