Humibacter sp. BT305: DVJ78_07540
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Entry
DVJ78_07540 CDS
T05558
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hum
Humibacter sp. BT305
Pathway
hum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DVJ78_07540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hum03400
]
DVJ78_07540
Enzymes [BR:
hum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DVJ78_07540
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DVJ78_07540
DNA repair and recombination proteins [BR:
hum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DVJ78_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AXH35276
LinkDB
All DBs
Position
complement(1582232..1583062)
Genome browser
AA seq
276 aa
AA seq
DB search
MPESPEVDALAGFLRENAVGARLEAVELIEFRALKTRARPLDELVGETVTAVRRFGKHLS
LDTTGADLVISFGRAGWATWSDGTAPTDDAGSGQADGPAVLARLRFDGGRELAVTDAGAW
LSLGLSVVDDPGDVSSIAKLGPDPSARGYSQADLDAVLVGRRKQLRALLQEQESLAGIGG
AYSDEILFAARLDPLMHASDLTEDERARLLVALREVLAEAFAACVGVPIDRQKAEKAARM
RVHGRAGEPCPEGDGVVVDVPGTKGAGQYCPACQTR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaatcgcctgaggtcgacgccctcgcgggcttcctgcgtgagaacgccgtcgga
gcgcgcctcgaggcggtcgagctcatcgagttccgtgctctgaagacccgtgcgcgtccg
ctcgacgagctcgtcggagagaccgtcacggcggtgcgacggttcgggaagcacctctcg
ctcgacacgaccggggccgatctcgtgatctccttcggccgggccggctgggcgacgtgg
agcgacggcacggcgcccacggacgacgccggcagcgggcaggcggacggccccgccgtc
ctcgcgcgcctccgcttcgacggcggcagggagctggccgtcaccgacgccggcgcctgg
ctctcgctcgggctctcggtggtcgacgaccccggggacgtgtcgtccatcgcgaagctg
ggcccggatccgagcgcccgaggctactcgcaggccgacctcgacgccgtcctggtcggc
cgacggaagcagctccgcgctctgctgcaggagcaggagtcgctcgcgggcatcggcggc
gcctactccgacgagatcctcttcgccgcgcgactcgatccgctgatgcacgcgtccgat
ctgaccgaggacgagcgcgcacgcctcctcgtcgccctgcgcgaggtgctcgccgaggcc
ttcgcggcctgcgtgggcgtcccgatcgaccgacagaaggcggagaaggcggcacggatg
cgggtgcacggccgcgcgggcgagccctgtcccgagggggacggggtggtggtcgacgtg
ccggggacgaagggggcggggcagtactgccccgcctgccagacccgctga
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