Humibacter sp. BT305: DVJ78_07585
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Entry
DVJ78_07585 CDS
T05558
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hum
Humibacter sp. BT305
Pathway
hum03030
DNA replication
hum03430
Mismatch repair
hum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DVJ78_07585
03430 Mismatch repair
DVJ78_07585
03440 Homologous recombination
DVJ78_07585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hum03032
]
DVJ78_07585
03400 DNA repair and recombination proteins [BR:
hum03400
]
DVJ78_07585
Enzymes [BR:
hum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DVJ78_07585
DNA replication proteins [BR:
hum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DVJ78_07585
DNA repair and recombination proteins [BR:
hum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DVJ78_07585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
DNA_pol3_gamma3
AAA_5
AAA_11
RNA_helicase
AAA_29
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AXH35284
LinkDB
All DBs
Position
1590547..1591764
Genome browser
AA seq
405 aa
AA seq
DB search
MSVWDDLTGQPAAVDVFRAAAGSGSAPGERGAGSAPDSMTHAWLITGPPGSGRSNLAYAF
ASALLCTRGGCGECADCRQVAARTHPDLSVLATERVIISIDEVRSLVSSSQFSPSVSRYR
VVVIEDADRMVERTSNVLLKALEEPPERTVWILCAPSEADLLPTIRSRVRSVRLRVPSVS
DVAALLERRDGVDPEVALVAAREAQSHIGMAHRLATDEEARRRRAETVDLALSVSTVGEA
VAGAARLLEIAGADAKAITEQRDAEEREHALRSLGVEPGQAVPMALRGQIKALEDDQKRR
ATRSLRDGLDRILTDLQSLYRDLVLLQLGAEVELVNASIEDRLRALAEALDPVSVLSALD
ALTDARRRIQANVAPTLALEAMLVTLAQSRAQAHVPSRPSRKASV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgtgggacgacctcacggggcagcctgccgccgtcgacgtgttccgggcggcc
gcgggctccgggagcgcgccaggggagcgcggcgccggctccgctcccgactcgatgacg
cacgcgtggctcatcaccggcccgcccgggtctggtcgctcgaacctcgcctacgcgttc
gcgtcggccctgctgtgcacgcggggcggatgcggcgagtgcgccgactgccgccaggtc
gcggcccgcacgcatcccgacctgtcggtgctggccaccgagcgggtgatcatctcgatc
gacgaggtgcgctcgctcgtctcgtcgtcgcagttctccccgtcggtgtcgcgctaccgc
gtcgtggtcatcgaggatgccgaccgcatggtcgagcgcacctccaacgtcctgctcaag
gcgctcgaggagccgcccgagcgcacggtgtggatcctgtgcgccccgagcgaggccgat
ctcctgccgacgatccgctcgcgggtgcggtccgtgcggctgcgggtgccgtcggtgtcc
gacgtcgccgcgctgctggagcgccgcgacggcgtcgaccccgaggtcgccctcgtggcc
gctcgcgaggcccagagccacatcggcatggcgcaccggctcgccaccgacgaggaggca
cgtcgtcgtcgggccgagacggtcgatctcgcgctgtcggtctcgacggtgggtgaggcg
gtcgcgggagccgctcgcctgctcgagatcgccggtgccgacgcgaaggcgatcaccgag
cagcgcgatgccgaggagcgcgagcacgccctccggtcgctcggggtcgagccgggccag
gccgtccccatggccctgcgaggccagatcaaggcgctggaggacgaccagaagcggcgg
gccacacgcagcctccgcgacggcctcgaccgcatcctcaccgacctccagtcgctgtac
cgcgatctggtgctgctgcagctcggcgccgaggtggagctggtcaacgccagcatcgag
gatcggctccgcgctctcgccgaggcgctcgatccggtctccgtgctgtccgctctcgac
gcgctcacagacgcgcgtcggaggatacaggccaacgtcgcccccaccctggccctcgag
gccatgctggtgacgctcgcccagtcgagggcgcaggcccacgtcccgtcccgtccgtca
cgaaaggcctccgtgtga
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