Humibacter sp. BT305: DVJ78_08645
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Entry
DVJ78_08645 CDS
T05558
Name
(GenBank) RNA polymerase sigma factor
Organism
hum
Humibacter sp. BT305
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Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AXH37252
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Position
complement(1830441..1831658)
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AA seq
405 aa
AA seq
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MRPTLDAVWRIEGGRIVATLAAACRDLGLAEDLAQEAFVEALRSWPDGGVPDNPGAWLTT
VGKRRLIDTWRRRERLDERHRAMAAELEEHAEDRWEPIDDDVLRLVFTACHPVLSKEAQI
ALTLRVVAGLSTEEIVRLFVVPVATVQQRIVRAKKTLGAAAVPFETPEPSEWRARLSAVL
GVVYLVYTEGYSATTGDRWMRVELADEALRLGRMVAGLLPREPEAHALVALMELQSSRFP
ARTAADGSPILLDDQDRTRWDRAQIERGRAALRQADALGRGRGAYALQAAIAECHASAPS
ADETDWERIVLLYEALGRLAPNPVVDLNRAVAISRATGPASALLIVDRLAGDGALRGSHL
LPSVRSELLAQLGRTEEARSELATAAALAHNARTRAVLEAKLAAL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atccgccccaccctcgacgccgtctggcgcatcgagggcgggcggatcgtcgccaccctc
gccgcagcgtgccgcgacctcggtctcgccgaggacctggcacaggaggcgttcgtcgag
gcgctccgctcctggccggacggcggcgtgcccgacaaccccggagcctggctcaccacc
gtcgggaagcggcgcctcatcgacacctggcgtcgccgcgagcgtctcgacgaacgccat
cgggcgatggcggcggagctcgaggagcatgcggaggaccgatgggagccgatcgacgac
gacgtgctgcgcctggtcttcacggcctgccatccggtgctctcgaaggaggcgcagatc
gcgctcaccctccgtgtggtcgcgggcctcagcacggaggagatcgtgcgcctgttcgtc
gtccccgtcgccaccgtgcagcagcggatcgtgcgggcgaagaagacgctcggcgccgcc
gccgtgccgttcgagacgcccgagccgtccgagtggcgggcacgcctgtcggcggtgctc
ggcgtggtctacctcgtctacacggagggctactcggcgacgaccggcgaccggtggatg
cgcgtcgagctcgccgacgaggcgctgcgcctggggcggatggtcgcggggctgctcccc
cgcgagcccgaggcgcacgcgctggtggcgctgatggagctgcagtcgtcacggttcccg
gcccgcaccgcggccgacggctcccccatcctgctcgacgaccaggaccgcacgcgctgg
gatcgcgctcagatcgagcgcggccgagcggcactccggcaggcggatgcgctgggtcgc
ggccggggggcctacgccctgcaggcggcgatcgccgagtgccacgcgtccgcaccctcg
gcggacgagaccgactgggagcggatcgtgctcctctacgaggcgctcggacgcctcgca
cccaatcccgtcgtcgacctcaaccgggccgtggcgatctctcgggcgacggggcccgca
tccgccctgctcatcgtcgaccggctcgcgggcgacggcgccctgcgcggctcgcacctg
ctgccgagcgtgcgcagcgagctgctcgcgcagctgggccgcaccgaggaggcgcgctcc
gagctcgccaccgcggccgccctcgcgcacaacgcgcgcacccgcgccgtcctcgaggcg
aagctcgccgccctctga
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