Humibacter sp. BT305: DVJ78_09790
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Entry
DVJ78_09790 CDS
T05558
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
hum
Humibacter sp. BT305
Pathway
hum00260
Glycine, serine and threonine metabolism
hum00630
Glyoxylate and dicarboxylate metabolism
hum00670
One carbon pool by folate
hum00785
Lipoic acid metabolism
hum01100
Metabolic pathways
hum01110
Biosynthesis of secondary metabolites
hum01200
Carbon metabolism
Module
hum_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DVJ78_09790 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DVJ78_09790 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DVJ78_09790 (gcvP)
00670 One carbon pool by folate
DVJ78_09790 (gcvP)
Enzymes [BR:
hum01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
DVJ78_09790 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AXH35654
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Position
2079394..2082267
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AA seq
957 aa
AA seq
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MTDGFVSRHIGTDSAAQARMLETLGYESVDALVRAAIPTGIQQTSSLDALPVPASEREAL
AELRALASLNRVNRSFLGLGYYDTVTPAVITRCVLENPSWYTAYTPYQPEISQGRLEALI
NFQTMVSELTGLATGNASMLDEGTAAVEGMLLARRASRSRSNVFVVDADALPQTRALLAS
RAAPVGIEVVDADLSSAELPPVLHEAFGALVQYPGASGRVADPSAVIAAVHAGGGLAVVA
ADLLAMTLLTPPGELGADIAVGTSQRFGVPMGFGGPHAGYLAVRDGLERQLPGRLVGVSV
DATGRTAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPDGLRAIAARVAS
HARAFAGLVRAGGLSTVHDAFFDTVLVRVPDARDAVVRAHDAGLLLRLVDGSTVGVSFDE
TTEPADVAAVARVLTGDPTTAATAGETEGLGLPAALARTSAFLEHPVFASHHSETSMMRY
LKRLADADYALDRGMIPLGSCTMKLNAATEMEAITWPEFAGVHPFAPESDVAGHLQLIDQ
LERWLAEVTGYDSVSLQPNAGSQGELSGLLAIREYHRSRGDEGRTVCLIPSSAHGTNAAS
AVLAGMRVVVVACDDLGNVDLDDLRARIAEHADALAALMVTYPSTHGVYEHDIAEICRLV
HAAGGQVYIDGANLNALLGFARFGDLGGDVSHLNLHKTFCIPHGGGGPGVGPVAAKAHLA
PFLPGHAFAQHAEHASLELGTVVHGGPTVSAAPYGSPSILPISWAYVRMMGADGLQRATA
AAVLSANYLAARLRDAFPVLYTGDAGLVAHECILDLRELTQRTGVTVDDVAKRLIDYGFH
APTMSFPVPGTLMVEPTESEDLAELDRFVEAMLAIRAEIDRVASGEWPVESSPLRHAPHT
AESIAVDDWSMPYDRTTAVHPVPTLVRGKYWPPVRRIDQAYGDRNLFCACPPPDAFE
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggcttcgtctcccgccacatcggaacggactcggcagctcaggcgcgcatg
ctcgagacgctcggctacgagagcgtcgacgccctggtccgtgccgccatcccgaccggg
atccagcagacctcgtcgctcgacgccctgcccgttcccgcctcggaacgcgaggccctc
gccgagctgcgggccctcgcctccctgaaccgggtgaaccgctccttcctcggtctgggc
tactacgacaccgtcacgccggcggtgatcacgcggtgcgtgctcgagaaccccagttgg
tacaccgcgtacacgccgtaccagcccgagatctcgcagggccggctcgaggccctgatc
aacttccagaccatggtctccgagctcacgggcctcgccaccggcaacgcctccatgctc
gacgagggcaccgcggccgtcgagggcatgctgctcgcgcgccgcgccagcaggtcgcgc
tcgaacgtcttcgtcgtcgacgcggatgcgctgccgcagacgcgcgcgctcctggcctcg
cgggccgcgccggtgggcatcgaggtggtcgatgccgatctgtccagcgccgagctgcct
cctgtcctgcacgaggccttcggagcgctggtccagtatcccggcgcgtccggccgcgtg
gccgatccctctgcggtgatcgccgccgtgcacgcgggcggcggcctcgcggtcgtcgcc
gccgacctgctggcgatgacgctgctcaccccaccgggcgagctcggggccgacatcgcc
gtcgggacgtcccagcgcttcggcgtgcccatgggattcggcggtccgcacgccggatac
ctcgccgtgcgcgacggcctcgagcggcagctgcccggtcgcctggtcggcgtgagcgtg
gatgcgacgggacggaccgcctatcggctgagcctgcagacccgtgagcagcacatccgt
cgtgagaaggctacgtcgaacatctgcaccgcgcaggtgctcctcgccgtcatggcgagc
atgtacgcggtctaccacggcccggatggcctgcgcgcgatcgcggcccgtgtcgcctcc
cacgcccgggccttcgccggactggtccgcgcgggcgggctctcgaccgtgcacgatgcc
ttcttcgacacggtgctcgtccgggtgccggatgcgcgggacgccgtggtcagagcccac
gacgcgggtctcctgctccgcctggtcgacgggtcgaccgtcggggtgtccttcgacgag
acgaccgaacccgccgacgtcgcggcggtggcgcgcgtgctcaccggcgacccgacgacc
gcggcgaccgcgggagagacggagggcctcggccttcccgccgccctcgcccggacgtcg
gcgttcctcgagcacccggtcttcgcgtcccaccactccgagacgagcatgatgcgctac
ctcaagcgcctcgccgacgccgactacgcgctcgaccgcggcatgatcccgctcggatcg
tgcacgatgaagctcaacgccgccacggagatggaggcgatcacctggccggagttcgcg
ggcgtccatccgttcgctccggagagcgacgtcgcgggccacctgcagctgatcgaccag
ctcgagcgctggctggccgaggtgaccgggtacgactccgtgtcgcttcagccgaacgcg
ggcagtcagggtgagctctccgggctcctcgccatccgggagtaccaccggtcgcgcggc
gacgagggccggacggtctgtctgatcccgtcgagcgctcacggcacgaacgccgcctcg
gcggtgctcgcgggcatgcgcgtggtcgtggtggcctgcgacgacctcggcaacgtcgac
ctcgacgacctgcgggccaggatcgcggagcatgccgacgcgctcgccgccctcatggtg
acctacccgtccacccacggcgtctacgagcacgacatcgcggagatctgccgtctcgtc
cacgccgccggcggtcaggtgtacatcgacggcgcgaacctcaacgccctcctgggcttc
gcgcggttcggggatctcggcggagacgtctcgcacctcaacctgcacaagacgttctgc
atcccccacggcgggggaggtccgggcgtcggaccggtcgccgccaaggctcacctggct
ccattcctcccggggcatgcgttcgctcagcacgccgagcacgcctcgctcgagctgggc
acggtcgtgcacggcggtccgacggtgtcggcggcgccctacggcagcccgagcatcctg
cccatcagctgggcgtacgtccggatgatgggggccgacggcctccagcgtgcgacggcg
gccgccgtgctgtcggcgaactacctcgccgcgcgcctccgcgacgcgttcccggtcctc
tacaccggcgatgcgggactcgtcgcccacgagtgcatcctcgacctgcgcgagctgacc
cagcggaccggggtgaccgtcgacgacgtcgccaagcgcctcatcgactacggcttccac
gcgccgacgatgagcttccccgtcccggggacgctcatggtcgagccgaccgagagcgag
gacctcgccgagctcgatcggttcgtcgaggcgatgctcgcgatccgcgccgagatcgac
cgcgtcgcgtctggggagtggccggtcgagtcgagccccctgcgtcacgcgccccacacg
gcggagtcgatcgcggtcgacgactggtcgatgccgtacgaccgcacgacggcggtgcat
ccggttccgacgctggtcaggggcaagtactggccgccggtccgacggatcgatcaggcg
tacggcgaccggaacctgttctgcgcctgtccgccgcccgacgcgttcgagtga
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