Humibacter sp. BT305: DVJ78_10435
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Entry
DVJ78_10435 CDS
T05558
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hum
Humibacter sp. BT305
Pathway
hum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DVJ78_10435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hum03400
]
DVJ78_10435
Enzymes [BR:
hum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DVJ78_10435
DNA repair and recombination proteins [BR:
hum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DVJ78_10435
Prokaryotic type
DVJ78_10435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AXH35763
LinkDB
All DBs
Position
2228063..2228755
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AA seq
230 aa
AA seq
DB search
MTALSLPQLAEAGLVDPGWAAALEPVGPTLAALGDFLRAETAAGRGYLPAGPDVLRAFRT
PLADVRVLIVGQDPYPTPGHPIGLSFAVERHVRPVPRSLGNIYRELRDDLGIEPPPHGDL
TRWSENGVMLLNRVLTVQPGQPGSHRGRGWEQITDRAIEVLAGRGGPLVAILWGRDAASL
RPALGSVPSVSSPHPSPLSASRGFFGSKPFSAVNRLLVEQGADPVDWRLD
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccctctccctcccgcagctcgccgaggcgggtctcgtcgatcccggatgggcg
gcggcgctcgagcccgtggggccgacgctcgccgcgctcggcgacttcctgcgtgccgag
accgccgcaggcaggggctacctccccgccggtccggatgtgctccgggcgttccggacg
ccgctggccgacgtccgggtgctcatcgtggggcaggatccctacccgaccccggggcat
ccgatcgggctctcgttcgccgtcgagcgtcacgtccgcccggtgccgcgcagtctcggc
aacatctaccgggagctccgcgacgacctcgggatcgagccgccgccacacggcgacctg
acgcggtggagcgagaacggggtcatgcttctcaacagggtcctcacggtgcagccgggg
cagcccggatcccaccggggtcgtggctgggagcagatcaccgaccgcgccatcgaggtc
ctggccggtcgcggcggcccactggtcgcgatcctctgggggcgcgacgcggcctccctc
cgccccgcgctcggctccgtgccctcggtgtcgagcccgcatccgagcccgctctcggcc
tcccgcggcttcttcggctcgaagccgttctccgcggtgaaccgcctgctcgtcgagcag
ggtgccgacccggtcgactggcgcctggactga
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