KEGG   Humibacter sp. BT305: DVJ78_12485
Entry
DVJ78_12485       CDS       T05558                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
hum  Humibacter sp. BT305
Pathway
hum00010  Glycolysis / Gluconeogenesis
hum00020  Citrate cycle (TCA cycle)
hum00260  Glycine, serine and threonine metabolism
hum00280  Valine, leucine and isoleucine degradation
hum00310  Lysine degradation
hum00380  Tryptophan metabolism
hum00620  Pyruvate metabolism
hum00630  Glyoxylate and dicarboxylate metabolism
hum00640  Propanoate metabolism
hum00670  One carbon pool by folate
hum00785  Lipoic acid metabolism
hum01100  Metabolic pathways
hum01110  Biosynthesis of secondary metabolites
hum01120  Microbial metabolism in diverse environments
hum01200  Carbon metabolism
hum01210  2-Oxocarboxylic acid metabolism
hum01240  Biosynthesis of cofactors
Module
hum_M00009  Citrate cycle (TCA cycle, Krebs cycle)
hum_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hum_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
hum_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:hum00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DVJ78_12485 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DVJ78_12485 (lpdA)
   00620 Pyruvate metabolism
    DVJ78_12485 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DVJ78_12485 (lpdA)
   00640 Propanoate metabolism
    DVJ78_12485 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DVJ78_12485 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DVJ78_12485 (lpdA)
   00310 Lysine degradation
    DVJ78_12485 (lpdA)
   00380 Tryptophan metabolism
    DVJ78_12485 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DVJ78_12485 (lpdA)
   00670 One carbon pool by folate
    DVJ78_12485 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hum04147]
    DVJ78_12485 (lpdA)
Enzymes [BR:hum01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DVJ78_12485 (lpdA)
Exosome [BR:hum04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DVJ78_12485 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_binding_2 Pyr_redox_3 DAO FAD_binding_3 NAD_binding_8 Thi4 HI0933_like GIDA FAD_oxidored 2-Hacid_dh_C 3HCDH_N AlaDh_PNT_C Lycopene_cycl ApbA UDPG_MGDP_dh_N Amino_oxidase
Other DBs
NCBI-ProteinID: AXH36122
LinkDB
Position
2654428..2655825
AA seq 465 aa
MTHHDLVILGAGPGGYVAAVRAAQLGLDVAVVERRFWGGVCLNVGCVPAKTLLRNAEVGR
MVTTEASMFGISGEVSLDYGVAFDRSRSVSDARAKGVRFLMRKNGVTQYDGEGTFTGPGS
MSVTLTDGTTTELTFDDAIIATGSTTRLLPGVELSENVVTYESLILTRELPDDIVIIGAG
AIGLEFAYVMSAFGVDVTVIEYLDRALPNEDADVSKEVARRFRALGVPILTSTRVLSVED
DGDRVTVGYVDRDGNPGAITAAKALIAVGFAPNVEGYGLETTGVRLTERGAIEIDDRMRT
TTPGLYAIGDVTAKLQLAHVAEAQGIVAAETVAGAETMPLGDYRMMPRATYFQPQVASFG
LTEQQARDEGYDVVVATFPMSANAKAHALGDAGGFVKLVADRRYLELLGGHLVGLDVSEL
LPELTLAQKWDLGVHELARNVHTHPSLSESLQDAFHGLEGAFINL
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgacgcaccacgacctggtgatcctgggcgcgggccctggcggctacgtcgccgccgtg
cgagcggcccagctcggactcgacgtcgccgtcgtcgaacggaggttctggggtggggtc
tgcctcaacgtcggctgcgtccccgcgaagacgctgctccgcaacgcggaggtggggcgc
atggtcaccaccgaggcgagcatgttcggcatctcgggcgaggtctctctcgactacggc
gtcgccttcgaccgcagccggtcggtgagcgacgcccgcgcgaagggcgtccggttcctc
atgcgcaagaacggggtgacgcagtacgacggcgaggggaccttcaccgggcccgggtcg
atgtcggtcaccctgacggacgggaccacgacggagctgacgttcgacgacgcgatcatc
gcgaccggctccaccacgcggctcctgcccggcgtggagctcagcgagaacgtcgtcacg
tatgagtcgctcatcctcacccgcgagctgcccgacgacatcgtcatcatcggcgccggc
gcgatcgggctggagttcgcctatgtgatgtccgcgttcggcgtcgacgtcaccgtgatc
gagtacctcgaccgtgcgcttccgaacgaggacgccgacgtctcgaaggaggtggcacgg
cgcttccgcgcgctcggggtgccgatcctcacctccacccgcgtgctgtcggtcgaggac
gacggggaccgggtcacggtcggctacgtggatcgtgacggcaaccccggcgcgatcacc
gccgccaaggccctgatcgccgtcggcttcgctccgaacgtggagggctacgggctggag
accacgggcgtgcggctgaccgagcgcggcgccatcgagatcgacgaccggatgcgcacc
acgactccgggcctctacgccatcggcgacgtgaccgccaagctccagctcgcgcacgtc
gccgaggcgcaaggcatcgtggccgcggagaccgtcgccggcgccgagacgatgcccctc
ggcgactaccgcatgatgccgagggcgacctacttccagccccaggtcgccagcttcggg
ctgaccgagcagcaggcgcgcgacgagggatacgacgtcgtcgtggcgacgttcccgatg
tccgcgaacgcgaaggcgcacgccctgggcgacgcgggcggcttcgtgaagctcgtggcg
gaccggcggtacctggagctgctgggcgggcacctcgtcggactcgacgtgtcggagctg
ctccccgagctcacgctggcccagaagtgggacctcggcgtgcacgagctggcgcgcaac
gtgcacacgcatcccagtctgtcggagtcgctgcaggatgcgttccacggccttgaaggc
gccttcatcaacctgtga

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