Humibacter sp. BT305: DVJ78_13300
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Entry
DVJ78_13300 CDS
T05558
Name
(GenBank) fibronectin type III domain-containing protein
KO
K20276
large repetitive protein
Organism
hum
Humibacter sp. BT305
Pathway
hum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DVJ78_13300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
fn3
Suc_Porlyase_C
Motif
Other DBs
NCBI-ProteinID:
AXH36269
LinkDB
All DBs
Position
complement(2817829..2823720)
Genome browser
AA seq
1963 aa
AA seq
DB search
MKGALGTGRIGGWVAAHRSAAATLVSGGAVAALVAVVSVVSTGFVAQQVDLHDGTVWVTS
DLHHAAGRANPVVGELNGLVPLGAGSLDVDQSGSTVVVADRGDGEGRLVDTASMTADESF
PLPAGEASIVLSGDRAIVWSPESGSAWSTTVPALPAFDPDAAADVTVGPTGAMAAWQGRL
YAVSPATGSVYSLSSGEEQTSLAVDLAADADVTMTATDAGWIVFDRSTSRVISASGAVPV
SLDDPAGAVLQQPGEGRDGVLLATRSGLVRIDPTTGSTRSLSEGHSGAPAAPIEIDGCGY
AAWSDGTGWTDCASTAVTGRATSGEAGEAGETTFEGMGSESRLVFRTNGDGGVLLNDRTS
GRAWDVARDNAVIDDWDQLLDTTTTDPQQEDAATDAPDTPDPAQQPPVAVDDDLGARAGR
AQALTVLLNDYDVNGDTLVIDDVTVPDGVDWRVDIIDDGQQLQLTLPATATGTLAFGYGI
SDGRGGSARATVAVTIRAPGENSPPVQVRRSTLDVALGARATTDVRSDWYDPDADPFYLA
SAGTPPPDSVTFRPEGQVTYLDSGTSAGPRDISLVVSDGASTTAGTIPVVVHDPADVPLV
ADGFVVSLNAGVEDTVEPLPHVRGGTEALRLTTVGVRDGVTVDADYVQGAVRLTASSAGT
YLIDYSVADGSRTATGTMRLEVTAVPDANSAPVTVPHTTFVRQGSSVEVDVLAGDYDPAG
AVLIVTSAGPATDPGVQVEVLEQRTIRVTLTGPLAGGSTSFAYTVSNGLASAAGSVTVVE
VTPPAIRQPPVAVADVASVRVGDVVDIPVLDNDSQPDGDQLSLHADLARPLSAGSGLLFA
SGSVLRYLAPATPGEYTAEYRVDAPDGQWATAQVTIRVREADAASNFAPVPARITARVLS
GETVRIPIPLTGIDPDGDSVQFAGVDSAPEKGTISATGVSWLEYTAGDYSAGTDSFGYTV
VDSLGARASGTIRVGISPRADGARPPVATPDEVVVRPGRTVLVPVLANDSDPDGSPLSLV
RVSAQDGAATAAVSGDLVAITAPSTPGRYGFVYEIENQRGGTSSTFVTADVTPDAPLARP
VVSDTVLTLDDIAGRDSVDVDVLEKVFFAEGPASQLDLRVGDGYSSAASVTPEHRLRVEV
REGRQIIPFTVAHPEDPTITASGFVWVPGTRDALPQLRSGAPALVVQSGAELRIPLADQV
VVAGDGTPRISDPNTVRATHADGSSLVSGDTTLVYRSAADYYGPASISFEVADGAGPDAR
RATLVLPITVRPATNQPPVFDGAVIEFEPGQQKTIDLTRLTTYPYPGAGNLLSYRVLGEA
PPGFAFSLDGTTLTMTADPSTRRGVTGSLSIGVADKQSEGRSGRIDVSVVASTRPLAVLG
TDSVIAPRGGTTTVDVLANDRAGNPFPDVPLQVVAVRGTDSAALPAGVSVATSADRASLS
VTVAGDAAPGDLTLQYQVADATQDSSRFVWGTVRVSIQDRPAPVTGLVVAGFGDREVDVS
FAPGAANNSAISAFLATATTASGTSVTTTCATTRCAVRTPGNGSASAARITVSAQNGIGA
SDPTPLGPLVWSDVLPGPPTGLALTPGDGSIRASWSPAVVPDGGSPVSAYEVRVDGRLVQ
TLPACSSACATTLGGVTNGVSTTVVVTAKNDAYPALAVWSGSEASGTTTPFGAPIASGVS
AVAETGAAGRDVVVGWSGFGDNGNPVAGYVAQLLRAGSGVPQGAQACSVSEGRVSLPGVG
GDVLAQQQTGGPGAVRFASLDASSADYSVVVWGWNAAGCTPSAVQTVSVYPRPGVPTATV
TMVQDGSTWDAYVSVSGDGSRYRIQRVDDGAAPVGDPADFSGAGFPRALVGGAFGEVLRF
RLQACSVWSTVQLCGDWSAPYAAPEPSLTFDLDPDPQLIGDTFSWVNPPANGGLPAAFVC
GRSGSTATATATGPTCTVPPGDGAPWLEVTVAGHSYTVSGSKG
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
gtgaagggcgcactgggcacgggtcggatcggcgggtgggtcgccgctcaccgctcggcc
gctgcgacgctcgtcagcggcggcgcggtggcggcgctcgtcgccgtggtctccgtcgtc
tccacgggcttcgtggcgcagcaggtagacctccacgacggcaccgtctgggtgacgagc
gacctgcatcacgccgccggccgcgcgaacccggtggtcggcgagctgaacggtctcgtg
ccgctcggcgccggatccctcgacgtcgaccagagcgggtcgacggtcgtggtggccgac
cggggcgacggtgagggccgcctggtcgacaccgcgtcgatgaccgccgacgagtcgttc
ccccttcccgcgggcgaggcgtcgatcgtgctgagcggcgaccgcgccatcgtctggtcg
cccgagtccggttcggcctggtcgaccacggtcccggccctgccggccttcgaccccgac
gccgccgccgacgtgaccgtcggcccgacgggggcgatggccgcctggcaggggcgtctc
tacgcggtgtcgcccgcgaccggctcggtgtactcgctgtcgagcggcgaggagcagacc
tccctcgccgtcgacctcgccgccgacgccgacgtcacgatgacggcgaccgacgccggc
tggatcgtgttcgaccgcagcaccagccgcgtgatcagcgcctcgggcgccgtccccgtc
tccctcgacgaccccgccggggccgtgctccagcagcccggcgagggccgggacggcgtc
ctcctcgccacccgcagcggtctggtccggatcgacccgacgacgggctccactcgttcc
ctgtccgaggggcactccggtgctcccgccgccccgatcgagatcgacggatgcggctac
gccgcgtggtccgacggcacggggtggaccgactgcgcgtcgacggcagttaccgggcga
gcgacctccggcgaggcaggcgaggccggcgagacgacgttcgaggggatgggatcggag
tcgcgccttgtcttccgcacgaacggcgacgggggagtcctcctcaacgaccggacgtcc
ggacgcgcctgggacgtcgcacgcgacaacgcggtgatcgacgactgggaccagctgctc
gacaccacgacgaccgaccctcagcaggaggacgccgccaccgacgcccccgacacgcca
gacccggcgcagcagccgccggtggcggtcgacgacgatctcggggcccgggcgggtcgc
gcgcaggcgctgacggtgctgctcaacgactacgacgtgaacggcgacaccctcgtgatc
gacgacgtcaccgtccccgacggcgtggactggcgggtcgacatcatcgacgacggccag
cagctgcagctgaccctgccggccacggcgaccgggacgctcgcgttcgggtacgggatc
tccgacggccggggcgggagcgcccgggcgacggtcgccgtcacgatccgtgcccccggg
gagaactcccctcccgtgcaggtcaggcggtcgacgctcgacgtggcgctcggcgcccga
gcgaccaccgacgtgcgcagcgactggtacgaccccgacgcggacccgttctacctcgcc
tcggccgggaccccgccgcccgactcggtcacgttccgtcccgagggccaggtgacgtac
ctcgactccgggacctccgccggtccgcgcgacatctcgctcgtcgtcagcgacggagcc
tcgaccacggcggggacgatcccggtggtcgtgcacgaccccgccgacgtcccgctcgtc
gcggacggcttcgtggtgtcgctgaacgcgggcgtcgaggacacggtcgagcccctcccg
cacgtcaggggcggaacggaggcgctgcggctgaccacggtcggcgtgcgagacggcgtc
accgtcgatgccgactacgtccagggcgccgtgcgcctgacggcgtcgtcggccggcacc
tatctgatcgactactccgtcgccgacggatctcggacagcgacgggcacgatgcgactc
gaggtcaccgccgtcccggatgcgaacagcgctccggtcacggtgccccacaccaccttc
gtgcgtcagggcagcagcgtcgaggtcgacgtcctggccggcgactacgatcccgcgggc
gcggtgctcatcgtgacctccgccggccccgccaccgatccgggtgtccaggtggaggtc
ctcgagcagcggacgatccgggtcaccctcaccgggccgctcgcgggagggtcgacctcc
ttcgcctacacggtcagcaacgggctcgcctcggcggcgggctcggtcaccgtcgtcgag
gtgacgcctcccgccatcaggcagcccccggtcgcggtggcggatgtcgcgtccgtccgc
gtcggcgacgtcgtcgacatcccggtgctcgacaacgacagccagcccgacggcgaccag
ctcagcctccatgccgacctcgcccgcccgctgtccgccgggtcggggctcctgttcgcc
tcgggctccgtgctgcgctacctcgctccggccacgcccggcgagtacacggcggagtac
cgggtcgacgcacccgacgggcagtgggccacggcgcaggtcacgatccgcgtgcgcgag
gccgacgccgcgtcgaacttcgcgcccgtccccgcgcggatcaccgcccgtgtcctctcg
ggcgagaccgtccgcatccccatcccgctcacggggatcgaccccgacggcgactcggtg
cagttcgccggcgtcgactccgcgccggagaagggcacgatctccgccacgggcgtctcc
tggctcgagtacacggcgggcgactactccgccgggacggactcgttcggctacaccgtg
gtcgacagcctcggagcccgggcgagcgggaccatccgggtcggcatctcgccccgggcc
gacggagcgcgcccgcccgtcgcgacgccggacgaggtcgtggtccgtccggggcgcacc
gtcctcgtccccgtcctcgccaacgactccgaccccgacggcagcccgctcagcctggtc
cgggtctccgcgcaggacggggcggcgaccgccgccgtgtcgggcgacctcgtcgcgatc
acggcaccgtcgacgcccgggcgttacggcttcgtctacgagatcgagaaccagcgaggc
gggacgagctcgaccttcgtcaccgccgacgtcaccccggatgcgccgctcgcccggccc
gtcgtctccgacaccgtgctcaccctcgacgacatcgcgggccgcgacagcgtcgacgtc
gacgtgctcgagaaggtcttcttcgccgaggggccggcgtcgcagctcgacctccgtgtc
ggcgacgggtactcgtccgcggcctcggtcacgcccgagcaccggctgcgcgtcgaggtc
cgcgagggccggcagatcatcccgttcacggtcgcccaccccgaggatccgaccatcacg
gcgtccgggttcgtctgggtgccgggcacacgcgatgcgcttccgcagctgcgttccggt
gcaccggccctcgtcgtgcagagcggagccgagttgcggatccccctcgccgatcaggtc
gtggtcgccggcgacgggacgccccgcatctccgatcccaacaccgtccgtgccacgcac
gccgatgggtcctcgctggtgtccggcgacacgaccctggtctaccgcagtgcggccgac
tactacggcccggcctcgatctcgttcgaggtcgccgacggcgccggaccggatgcccgg
cgggccacgctcgtgctgcccatcacggtcagacccgccacgaaccagccccccgtcttc
gacggtgccgtcatcgagttcgagcccggtcagcagaagaccatcgacctcacgaggctg
acgacctacccgtatccgggcgcggggaacctgctgagctaccgggtgctgggggaggcg
cctcccggcttcgccttctccctcgacggcacgaccctgacgatgacggccgacccgtcg
acccggcgcggggtcacgggctccctctcgatcggcgtcgccgacaagcagagcgagggc
cgctccggccgcatcgacgtgtcggtcgtcgcgtcgacgagaccgctggcggtcctcggc
accgactccgtgatcgcgccgcgcggaggcaccaccacggtcgacgtgctcgcgaacgac
cgggcaggcaacccgttccccgacgtgcccctccaggtcgtcgccgtccggggaaccgac
tccgccgcgctccccgccggggtgtcggtggccacgtcggccgacagggcgtcgctctcg
gtgacggtcgcgggcgacgcggctccgggcgacctcaccctgcagtaccaggtggcggat
gcgacgcaagactcctcgcggttcgtctggggcacggtccgcgtctcgatccaggacaga
ccggcgccggtgacgggtctcgtggtcgccgggttcggcgatcgcgaggtggacgtgtcg
ttcgctccgggcgcggccaacaactcggcgatctcggccttcctcgccacggcgacgacg
gcctccggaacgtcggtcacgaccacctgcgcgaccacgcgctgcgcggtgcggaccccg
gggaacggatcggcgtccgcggccaggatcacggtctcggcgcagaacggcatcggcgca
tccgatcccacgccgctcggcccgctggtctggtcggacgtgctccccggcccgccgacc
ggactggcgctcactccgggtgacggctcgatccgagcctcgtggagcccagcggtcgtc
cccgacggcggctcgccggtgtccgcctacgaggtgcgcgtcgacggacgactggtgcag
acgctgcccgcctgctcgtccgcctgcgccaccaccctcgggggagtcacgaacggcgtg
tcgaccaccgtcgtcgtcacggcgaagaacgacgcgtacccggccctggcggtgtggtcc
ggcagcgaggcgagcggcaccaccacccccttcggcgcccccatcgcctcgggagtgtcg
gccgtcgccgagacgggcgccgcgggacgcgacgtcgtggtgggctggtcgggcttcggc
gacaacgggaacccggtggcgggatacgtcgcccagctcctgcgcgcgggatccggcgta
ccccagggggcgcaggcgtgctcggtctcggaggggagggtctctctccccggcgtcggc
ggcgacgtcctcgcccagcagcagaccggtggtccgggagcggtgcgcttcgcctcgctc
gacgcctcgagcgccgactactcggtcgtcgtgtgggggtggaacgcggcaggatgcacg
ccgtcggccgtgcagaccgtgtcggtctatccccggcccggtgtgcccacggcgaccgtg
accatggtgcaggacgggtcgacgtgggacgcctacgtctcggtcagcggcgacggatcg
cggtaccgcatccagcgcgtcgacgacggcgccgcccccgtcggcgatccggcggacttc
tccggcgcgggcttccctcgagcgctcgtcggcggtgcgttcggggaggtgctccgcttc
cggctccaggcgtgctcggtctggtcgacggtgcagctgtgcggcgactggtccgcgccg
tatgcggccccggagccgtccctgaccttcgacctggatcccgatccgcagctcatcggc
gacacgttctcctgggtcaacccgccggccaacggcggtctccccgccgcgttcgtctgc
ggccgaagcggctcgacggcgaccgccacggccaccgggccgacctgcaccgtcccgccg
ggcgacggagccccctggctcgaggtcaccgtggccggacactcgtacaccgtctccgga
tcgaagggatga
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