Humibacter sp. BT305: DVJ78_13860
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Entry
DVJ78_13860 CDS
T05558
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
hum
Humibacter sp. BT305
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hum03009
]
DVJ78_13860
Enzymes [BR:
hum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DVJ78_13860
Ribosome biogenesis [BR:
hum03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DVJ78_13860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
AXH36363
LinkDB
All DBs
Position
complement(2931676..2932473)
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AA seq
265 aa
AA seq
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MSPSSGSATGSSSGSSPSEEGVRLQKAMAAAGVASRRVSEQMIQDGRVEVNGTVVTELGT
RIDPLTDQVAVDGVAVQLDPGKRYVMLNKPVGVVSSLADERGRPDLTRFTSQFEERLFNV
GRLDAETSGLLILTNDGELAHVLAHPSFGVAKTYIAKVEGKVTPQTLTRLTKGIELDDGT
IAADRARLLDHGARGRSIVEVTLHSGRNRIVRRMLDAVGHPVVELVRRSFGPLHLGTLKA
GGMRELTKVEVGELLSLSRAGTNEE
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgtcgtccggttccgctaccggctcctcatccggttcctcgccctcggaggag
ggcgtgcgcctgcagaaggcgatggccgcggccggcgtcgcatcgcggcgggtgtcggag
cagatgatccaggacggccgggtcgaggtcaacggcacggtcgtcaccgagctcggcacc
cgcatcgacccgctcaccgaccaggtggcggtcgacggtgtcgccgtgcagctcgacccc
ggcaagcgctacgtcatgctcaacaagccggtcggcgtcgtgagctcgctcgccgacgag
cgcggtcgtcccgacctcacccgcttcacctcgcagttcgaggagcggctgttcaacgtg
ggccggctcgacgccgagaccagcggactgctcatcctcaccaacgacggcgagctcgcc
cacgtgctcgcgcatccgtcgttcggggtcgcgaagacctacatcgccaaggtggagggc
aaggtgacgccgcagacgctgacgcgcctgacgaagggcatcgagctcgacgacggcacc
atcgccgccgaccgtgcgcgcctgctcgaccacggtgcgcgggggcgctcgatcgtcgag
gtgaccctgcactcggggcgcaaccgcatcgtgcgccggatgctcgacgcggtcgggcac
ccggtggtcgagctggtgcggcgctcgttcgggccgctgcacctcggcaccctcaaggcg
ggcgggatgcgcgagttgactaaggtggaggtcggcgagctgctcagtctctcgcgagcc
gggacgaacgaggagtag
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