Humibacter sp. BT305: DVJ78_13885
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Entry
DVJ78_13885 CDS
T05558
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
hum
Humibacter sp. BT305
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hum03036
]
DVJ78_13885 (xerD)
Chromosome and associated proteins [BR:
hum03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
DVJ78_13885 (xerD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AXH36366
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All DBs
Position
complement(2935657..2936595)
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AA seq
312 aa
AA seq
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MSGAVPAVSPALGFDRAVDGFLRHITVERGLAANTVTAYRRDLVRYREWLAGAGIAAPGD
VTESDVGLFAQWLRTPEGGTLSAASVARILSSVRALHRYLAEEGAVEADVTLEVRPPKLG
MRLPKAISIEQMERLLQAPSSDEPVGIRDRALLEMLYATGARVSELVGLDVDDVDGGDII
RVTGKGSKQRLVPVGRYAREALDTYLVRVRPEFSTRGRATPALFLGIRGQRLTRQGAWLV
IQAAARKADLEAHVSPHTFRHSFATHLLQGGADVRVVQDLLGHSSVATTQIYTHVTADSL
IDMYQTAHPRAR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggcgccgtgccggccgtgagcccggcgctcgggttcgacagggcggtcgacggc
ttcctgcggcacatcaccgtggagcggggcctcgcggcgaacacggtcacggcgtaccgg
cgcgacctcgtccgctatcgcgagtggctcgccggtgcgggcatcgccgcgcccggagac
gtcaccgagagcgacgtggggctcttcgcccagtggctccgtacgcccgagggcggcacg
ctcagcgccgcgtccgtggcgcgcatcctgtcgtcggtgcgagccctgcaccggtacctc
gccgaggagggcgccgtcgaggccgacgtgacgcttgaggtgcggccgcccaagctcggg
atgcgcctgccgaaggcgatctcgatcgagcagatggagcggctgctgcaggctccgtcg
tccgacgagccggtgggcatccgcgaccgcgcgctgctcgagatgctctacgccaccggc
gcccgtgtgtcggagctcgtggggctcgacgtcgacgacgtggacggcggcgacatcatc
cgcgtcacgggcaaggggagcaagcagcggctggtgccggtcggacgctacgcccgcgag
gccctcgacacgtatctcgtacgtgtgcggcccgagttctcgacccgcgggcgggcgacg
ccggcgctcttcctcggcatccggggccagcggctcacccgtcagggcgcgtggctggtg
atccaggccgcagcccgcaaggcggacctcgaggcgcacgtgtcaccgcacaccttccgg
cactccttcgcgacgcacctcctccagggcggggccgacgtgcgcgtggtgcaggacctc
ctcggacactcctcggtcgcgactacgcagatctacacccacgtgaccgccgactcgctg
atcgacatgtaccagaccgcgcatccgcgggcccggtga
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