Humibacter sp. BT305: DVJ78_14060
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Entry
DVJ78_14060 CDS
T05558
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hum
Humibacter sp. BT305
Pathway
hum00300
Lysine biosynthesis
hum00470
D-Amino acid metabolism
hum01100
Metabolic pathways
hum01110
Biosynthesis of secondary metabolites
hum01120
Microbial metabolism in diverse environments
hum01230
Biosynthesis of amino acids
Module
hum_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DVJ78_14060
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DVJ78_14060
Enzymes [BR:
hum01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DVJ78_14060
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Chap-C
Motif
Other DBs
NCBI-ProteinID:
AXH36390
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Position
complement(2973787..2974668)
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AA seq
293 aa
AA seq
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MSVDLRFTKGQGTGNDFVLFLDPDGHHDLSPSQVAALCDRRFGIGADGVLRAVRSENIAA
GGAALAEDPAAEWFMDYRNADGSIAEMCGNGIRVFVRYLIENGVVELVPGRTLPIGTRAG
VRDVIRSGTGFQVDLGRWRLEPDETLVSAREVPVARPGLGIDVGNPHVVVALADDAELEA
ADLTVIPHLDPAPVEGANVEFVVPREPLVRDGVGRIRMRVHERGSGETLSCGTGAAAAAL
AVRHWAGAGAPNEWRVDVPGGTVGVRMFPAEDGEHVALSGPAELVFEGDLSIA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgacctccgcttcaccaagggccagggcacgggcaacgacttcgtgctgttc
ctcgatcccgacggccaccatgacctctcgccgagccaggtggcggccctctgcgaccgc
cggttcgggatcggcgccgacggcgtcctgcgcgccgtccgctccgagaacatcgcggcg
ggtggtgccgcgctggcggaggatccggccgccgagtggttcatggactaccggaacgcc
gatgggtcgatcgccgagatgtgcggcaacggcatccgggtcttcgtccggtacctgatc
gagaacggcgtcgtcgagctcgtccccggccggaccctgccgatcggcacacgcgcgggc
gtgcgcgacgtgatccgcagcggcaccggcttccaggtggacctcgggcggtggcggctc
gagccggacgagacgctcgtcagcgcccgtgaggtgccggtggcgcgtccgggactcggc
atcgacgtcggcaacccgcacgtcgtggtcgctctcgccgacgacgccgagctcgaggcc
gccgacctcacggtgatcccgcacctcgaccccgcgcccgtggagggtgcgaacgtcgag
ttcgtcgtcccgcgcgagccgctggtccgcgacggcgtgggccgcatccggatgcgcgtg
cacgagcggggaagcggggagacgctttcctgcggaacgggcgctgcggccgccgcactc
gccgtacggcactgggcgggagcgggggctccgaacgagtggcgggtcgacgtgccgggt
ggcacggtcggagtgcgcatgttccccgcggaggacggcgagcacgtggccctgtccggt
ccggccgagctggtgttcgagggcgacctgtcgatcgcctga
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