Humibacter sp. BT305: DVJ78_14205
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Entry
DVJ78_14205 CDS
T05558
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hum
Humibacter sp. BT305
Pathway
hum03030
DNA replication
hum03430
Mismatch repair
hum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DVJ78_14205 (holA)
03430 Mismatch repair
DVJ78_14205 (holA)
03440 Homologous recombination
DVJ78_14205 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hum03032
]
DVJ78_14205 (holA)
03400 DNA repair and recombination proteins [BR:
hum03400
]
DVJ78_14205 (holA)
Enzymes [BR:
hum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DVJ78_14205 (holA)
DNA replication proteins [BR:
hum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DVJ78_14205 (holA)
DNA repair and recombination proteins [BR:
hum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DVJ78_14205 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AXH36416
LinkDB
All DBs
Position
complement(3003581..3004627)
Genome browser
AA seq
348 aa
AA seq
DB search
MATSRSRPAPARGSAKSPKSAIPQLSWSEVRPAPVVLITGSEGFLADRAGRILRDLLRAE
DPSLEVNDIDAASYAPGELLTLASPSLFQEPRLIRVSAAEKSSDAFLEEALDYLASPADD
TYVVIRHAGGVRGKKLLEGIRAASGTAIEIVCAELKKDTERYEFAVAEFKAAGKRVTPGA
VRALVSAFTDDLAELSSACSQLIADASDEITEATVERYYAGRVETNAFSVADAAIAGRYG
EAMALLRHALASGADPVPIVAAFAMKIRTMAKVAGTRGGSGQLAGQLGLAPWQIDRARRD
LSGWTSEGLGQVILALAAADENVKGASRDPVYALETVVATIAARGARP
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagtcggtcacgccccgcgcccgcgcggggctcggcgaagtcgccgaagtcg
gccatcccgcagctgagctggagcgaggtccgtccagccccggtcgtgctcatcaccggg
tccgaggggttcctcgccgatcgggcgggccgcatcctgcgcgacctgctccgggccgag
gatccgagcctcgaggtgaacgacatcgacgcggcgtcgtacgccccgggcgagctgctg
acgctggccagcccgtcgctcttccaggagccgcggctcatccgcgtgtccgccgccgag
aagtcctccgatgcgttcctcgaggaggccctcgactacctcgcctcaccggccgacgac
acctacgtcgtcatccggcacgcgggcggcgtgcggggcaagaagctcctcgaggggatc
cgcgccgcctcgggcacggcgatcgagatcgtctgcgccgagctgaagaaggacaccgag
cgctacgagttcgccgtggccgagttcaaggcggcgggcaaacgcgtgacccccggtgcg
gtgcgggcgctcgtctccgccttcaccgacgacctcgccgagctgtccagcgcctgctcg
cagctcatcgccgatgcgagcgacgagatcaccgaggcgaccgtcgagcgctactacgcc
gggcgggtcgagaccaatgcgttctcggtggccgacgccgcgatcgcgggcaggtacggc
gaggcgatggcgctgctcaggcacgccctcgcctccggggccgatccggtgccgatcgtc
gccgcgttcgcgatgaagatccggacgatggcgaaggtcgcaggcactcgcggcgggtcc
ggtcagctggcgggccagctcggcctcgccccgtggcagatcgaccgcgcccgccgtgac
ctctccggctggaccagcgaggggctcggccaggtgatcctggcgctcgccgccgccgac
gagaacgtcaagggcgcgtcgcgcgatccggtctacgccctcgagaccgtcgtcgcgacg
atcgccgcccgcggcgcccgtccctga
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