Humibacter sp. BT305: DVJ78_15465
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Entry
DVJ78_15465 CDS
T05558
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hum
Humibacter sp. BT305
Pathway
hum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVJ78_15465 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hum03019
]
DVJ78_15465 (groL)
03110 Chaperones and folding catalysts [BR:
hum03110
]
DVJ78_15465 (groL)
03029 Mitochondrial biogenesis [BR:
hum03029
]
DVJ78_15465 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hum04147
]
DVJ78_15465 (groL)
Enzymes [BR:
hum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DVJ78_15465 (groL)
Messenger RNA biogenesis [BR:
hum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DVJ78_15465 (groL)
Chaperones and folding catalysts [BR:
hum03110
]
Heat shock proteins
HSP60 / Chaperonin
DVJ78_15465 (groL)
Mitochondrial biogenesis [BR:
hum03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DVJ78_15465 (groL)
Exosome [BR:
hum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DVJ78_15465 (groL)
Exosomal proteins of other body fluids (saliva and urine)
DVJ78_15465 (groL)
Exosomal proteins of breast cancer cells
DVJ78_15465 (groL)
Exosomal proteins of colorectal cancer cells
DVJ78_15465 (groL)
Exosomal proteins of bladder cancer cells
DVJ78_15465 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
AXH36622
LinkDB
All DBs
Position
complement(3266359..3267978)
Genome browser
AA seq
539 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNTLADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGADPISLKKGIE
KAVAAVSAQLAANAKEIETKDEIAATASISAADPEIGAIIAEAIDKVGKEGVVTVEESNT
FGTELELTEGMRFDKGYLSQYFVTDPERQEAVFEDPYILIVNSKVSNIKDLLPIVDKVIQ
AGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKAPGFGDRRKAQLQDIAILTGGQVIS
EEVGLKLENVTLDLLGQARKVVITKDETTIVEGAGDPEAIAGRVAQIRAEIENTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GTAAFDTLELSGDEATGANIVKVAIEAPLKQIAFNAGLEPGVVAAKVRELPAGHGLNAAT
GEYVDLLAAGIIDPAKVTRSALQNAASIAGLFLTTEAVVADKPEKAAAAPADPTGGMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatcattgctttcgatgaggaggcccgccgcggcctcgagcgtggcctgaac
acgctggccgacgcggtgaaggtgaccctcgggcctcgcggtcgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgacggcgtctccatcgccaaggagatcgag
ctcgacgacccgtacgagaagatcggcgccgagctcgtcaaggaggtcgccaagaagacc
gacgacgtcgcgggcgacggcaccaccaccgcgaccgtgctcgcgcaggcgctcgtcaag
gagggcctccgcaacgtggccgccggcgccgacccgatcagcctgaagaagggcatcgag
aaggccgtcgcggccgtctccgctcagctcgcggcgaacgccaaggagatcgagaccaag
gacgagatcgcggccaccgcatccatctcggccgccgacccggagatcggcgcgatcatc
gccgaggccatcgacaaggtcggcaaggagggtgtcgtcaccgtcgaggagtcgaacacc
ttcggcaccgagctcgagctgaccgagggcatgcgcttcgacaagggctacctgtcgcag
tacttcgtcaccgacccggagcgacaggaggcggtcttcgaggacccctacatcctgatc
gtcaactccaaggtctcgaacatcaaggacctcctgccgatcgtcgacaaggtgatccag
gcgggcaagcagctcctcatcatcgctgaggacgtcgacggcgaggctctggccacgctc
gtcgtgaacaagatccgcggcatcttcaagtcggtcgccgtcaaggcccccggcttcggc
gaccgccgcaaggctcagctgcaggacatcgcgatcctcaccggcggccaggtcatctcc
gaggaggtcggtctcaagctcgagaacgtcaccctcgacctgctcggccaggctcgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgagggcgcgggcgaccccgaggccatc
gccggtcgcgtcgcgcagatccgcgccgagatcgagaacaccgacagcgactacgaccgc
gagaagctccaggagcgcctcgcgaagctcgccggcggtgtggcggtcatcaaggccggt
gccgcgaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtggccctcatccaggcc
ggtaccgccgcgttcgacacgctcgagctctcgggcgacgaggcgaccggtgcgaacatc
gtcaaggtcgccatcgaggctccgctgaagcagatcgcgttcaacgccggcctcgagccc
ggcgtcgtcgccgccaaggtgcgcgagctgcccgcgggtcacggcctcaacgccgcgacg
ggcgagtacgtcgacctgctcgctgcgggcatcatcgacccggccaaggtcacccgctcg
gcgctgcagaacgctgcgtcgatcgccggcctgttcctcaccaccgaggccgtcgtcgcc
gacaagccggagaaggccgcggctgctcccgccgacccgaccggtggcatggacttctag
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