Humibacter sp. BT305: DVJ78_15685
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Entry
DVJ78_15685 CDS
T05558
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hum
Humibacter sp. BT305
Pathway
hum00260
Glycine, serine and threonine metabolism
hum00460
Cyanoamino acid metabolism
hum00630
Glyoxylate and dicarboxylate metabolism
hum00670
One carbon pool by folate
hum00680
Methane metabolism
hum01100
Metabolic pathways
hum01110
Biosynthesis of secondary metabolites
hum01120
Microbial metabolism in diverse environments
hum01200
Carbon metabolism
hum01230
Biosynthesis of amino acids
hum01240
Biosynthesis of cofactors
hum04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DVJ78_15685
09102 Energy metabolism
00680 Methane metabolism
DVJ78_15685
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DVJ78_15685
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DVJ78_15685
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DVJ78_15685
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DVJ78_15685
Enzymes [BR:
hum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DVJ78_15685
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AXH36659
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Position
complement(3303111..3304478)
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AA seq
455 aa
AA seq
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MTGIRPRAWVDTESDFTQVRLVTKEPALSDRLPSTFTDPLSSVDPEIARVLELELGRQRS
TLEMIASENFVPRAVLEAQGSVLTNKYAEGYPGRRYYGGCEYVDVAEQLAIDRAKALFGA
GFANVQPHSGASANAAVLSAIANPGDTILGLELAHGGHLTHGMKLNFSGKLYNAVAYGVD
PETFRVDMDVVREKALEHRPQVLIAGWSAYPRQLDFAAFRAIADEVGAKLWVDMAHFAGL
VAAGLHPSPVPFADVTSSTVHKTIGGPRSGFILSNDADIAKKLNSNVFPGQQGGPLMHVI
AAKATAFKLAAEPEFVDRQERTLRGAQILAERLTADDTRAAGVDVLTGGTDVHLVLADLR
ESELDGKQAEDLLHEVGITVNRNSVPFDPRPPMVTSGLRIGTPALATRGFGDEEFTQVAD
IIAAALTPNPDVAALRQRVENLTEAFPLYPGLEQW
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacagggattcggccgcgcgcctgggtcgatacggaatccgacttcactcaagtccgt
cttgtcacgaaggagccagccttgtccgaccgcctgccctcgaccttcaccgatccgctg
tcgtcggtcgatcccgagatcgcccgtgtgctcgagctcgagctcggccgccagcgctcc
acgctcgagatgatcgcgagcgagaacttcgtcccccgtgccgtgctcgaggcccagggc
tcggtgctcacgaacaagtacgccgagggctaccccggccgccgctactacggcggctgc
gagtacgtcgacgtcgccgagcagctggcgatcgaccgcgcgaaggccctcttcggtgcg
ggcttcgccaacgtgcagccccactccggcgcctccgcgaacgcggccgtgctctccgcc
atcgccaaccccggcgacacgatcctcggcctcgagctcgctcatggcggccacctcacg
cacggcatgaagctgaacttctcgggcaagctctacaacgccgtcgcctacggcgtcgac
cccgagaccttccgggtcgacatggacgtcgtgcgcgagaaggcgctcgagcaccgtccg
caggtgctcatcgcgggctggtcggcgtacccgcgtcagctcgacttcgccgcgttccgt
gccatcgccgacgaggtgggcgcgaagctctgggtcgacatggcccacttcgccggtctc
gtggccgcgggactgcacccgtctcccgtgcccttcgccgacgtcacctcctcgaccgtg
cacaagaccatcggcggcccgcggtcgggcttcatcctctccaacgacgccgacatcgcg
aagaagctcaacagcaacgtcttccccggccagcagggcggcccgctcatgcacgtgatc
gccgcgaaggctaccgcgttcaagctcgccgccgagccggagttcgtcgaccgccaggag
cgcaccctccgtggtgcgcagatcctggccgagcgcctcaccgccgacgacacccgcgct
gcgggcgtcgacgtgctcaccggtggcaccgacgtgcacctcgtgctcgccgacctccgc
gagtcggagctcgacggcaagcaggccgaggacctgctgcacgaggtcggcatcacggtc
aaccgcaactccgtgccgttcgacccccgtcctccgatggtgacgtcgggcctgcgcatc
ggcacccccgccctggccacccgcggcttcggcgacgaggagttcacccaggtcgccgac
atcatcgccgcggccctgacgccgaacccggatgtcgccgcgctgcgccagcgcgtcgag
aacctgacggaggcgttcccgctctaccccggtctcgagcagtggtag
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