Humibacter sp. BT305: DVJ78_16695
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Entry
DVJ78_16695 CDS
T05558
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hum
Humibacter sp. BT305
Pathway
hum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DVJ78_16695 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hum01007
]
DVJ78_16695 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hum03016
]
DVJ78_16695 (lysS)
Enzymes [BR:
hum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
DVJ78_16695 (lysS)
Amino acid related enzymes [BR:
hum01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DVJ78_16695 (lysS)
Transfer RNA biogenesis [BR:
hum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DVJ78_16695 (lysS)
Prokaryotic type
Other AARSs
DVJ78_16695 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AXH36831
LinkDB
All DBs
Position
complement(3504813..3506354)
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AA seq
513 aa
AA seq
DB search
MTEDTTATPATALETPDDAATEQDVAEQDVSEQKAVRLGKRERLNAGPGAYPVSVPVTTT
IPEVRALWQHLQPGEESGEVVGLAGRVVNLRNTGRLCFVSLQAGDGTRIQGMVSQAKVGA
ESLAEFKELVDLGDHLFVHGEVIASRTGELSVMADAWQIAAKAILPLPNLYTELNEETRM
RSRYLDLIQRDQARQTVRTRAAAMASLRATFADRHYLEIETPMLQTIHGGAAARPFVTHS
NAFDTELYLRIAPELFLKRAVVGGIDRVFEINRNFRNEGADSTHSPEFAMLEAYEAYGDY
NTMAELTQTLVQNAAQAVSGSHVVTWADGTEYDLGGEWDRIDMYGSLSEAAGVEITPATS
LAELEALAASVGVEVHLPNHGKLVEELWEHFVKGGLTRPTFVMDFPVETSPLTRAHRSKP
GVVEKWDLYVRGFELATAYSELVDPVIQRERFVEQARQAAAGDVEAMRLDEDFLRALEFG
MPPSGGMGMGIDRLLMALTGLGIRETILFPLVK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaggacaccaccgccacgcccgccaccgccctcgagaccccggacgacgccgcc
accgagcaggacgtcgcggagcaggacgtctccgagcagaaggccgtgcggctgggcaag
cgcgagcggctgaacgccggcccgggcgcctacccggtgagcgtccccgtcaccacgacc
atcccggaggtccgcgcgctctggcagcacctgcagcccggcgaggagagcggcgaggtc
gtcggcctcgccggccgcgtggtcaacctccgcaacaccggccgtctctgcttcgtgtcc
ctgcaggccggcgacggcacccgcatccagggcatggtgtcgcaggcgaaggtgggcgcg
gagtcgctcgccgagttcaaggagctcgtcgacctcggcgaccacctgttcgtccacggc
gaggtcatcgcgagccgcaccggcgagctcagcgtcatggcggatgcgtggcagatcgcc
gccaaggccatcctcccgctgcccaacctctacaccgagctcaacgaggagacgaggatg
cgctcccgctacctcgacctcatccagcgcgaccaggcgcgccagaccgtgcgcacgcgt
gcggcggcgatggcgagcctgcgggcgacgttcgccgaccggcactacctcgagatcgag
acgccgatgctgcagacgatccacggcggcgcggccgcgcgtccgttcgtgacccactcg
aacgcgttcgacaccgagctctacctgcgcatcgcgcccgagctcttcctcaagcgcgcg
gtggtcggcggcatcgaccgggtgttcgagatcaaccgcaacttccgcaacgagggcgcc
gactccacgcacagccccgagttcgcgatgctcgaggcgtacgaggcctacggcgactac
aacaccatggccgagctcacccagaccctcgtgcagaacgcggcccaggccgtgtcgggc
tcgcacgtcgtgacctgggccgacggcaccgagtacgacctcggcggcgagtgggaccgc
atcgacatgtacggctccctctcggaggcggccggcgtcgagatcacgcccgccacgagc
ctggcggagctcgaggcgctcgccgcgagcgtcggcgtcgaggtgcacctgcccaaccac
ggcaagctcgtcgaggagctgtgggagcacttcgtgaagggcggcctcacccgcccgacc
ttcgtgatggacttccccgtcgagaccagcccgctcacccgggcccaccggtcgaagccc
ggcgtggtcgagaagtgggacctctacgtgcgcgggttcgagctcgccacggcgtactcc
gagctcgtcgaccccgtcatccagcgcgagcgcttcgtcgagcaggcgcgccaggccgcg
gcgggcgacgtcgaggcgatgcgcctcgacgaggacttcctccgcgcgctcgagttcggc
atgcccccgtcgggcggcatgggcatgggcatcgaccgcctcctcatggccctcaccggc
ctcggcatccgcgagaccatcctcttccccctcgtgaagtaa
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