Humibacter sp. BT305: DVJ78_18305
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Entry
DVJ78_18305 CDS
T05558
Name
(GenBank) type IV secretion protein Rhs
Organism
hum
Humibacter sp. BT305
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GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
Motif
Other DBs
NCBI-ProteinID:
AXH37529
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Position
unnamed1:78182..81955
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AA seq
1257 aa
AA seq
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MRARVVGLSVFLAVFLASGVATPSWAADEPVPDETLVAEFDGSNETLEDLTASIWAPPEE
ADDREIEAPEAPDVLWAPELGGRYGTEVVEPQQVPLAPAESPGSGNTSAPLREADPVPTG
DAVPEPSGTPNPDDDGELTSTPDPSSPSLETAAPGDDGSEDTDSPDSAGKQVSALSAPSG
VQVGAPGLGSLPSFGFKQIPISDDTVIRVNLANGNLLITANDAKISGPGVGLRIDRFYNG
LSTAAGTFGGGWSSSVVSNDVGLLASGNDRVFYGPSGFQSRFTWVSAGNWTTPPGINATL
TQPATTSDRYFLLTYNRTGEKLWFSQGGFLTGDFDRNDVGVSYTYSSGKLVSATQSSGRS
ATFNWSGSSLQTITDSANRTTTFTKNSLSQLSKVQSPDGAVNEFTYDSTGRIKTITVPSS
NPGSTVVTFTYDTAHRVKTVIQKSTSPTWGSKADLTTTFTYGSGVTSVSDPKQNTTQYAV
DAQGLITSATDPVGHVRSSQYNANGDVTATTDALGSGSTPGNQTTVSYDQLFNTTGVQLP
TGAAASAIYAQGMNCPTASTGTQFQVQCSIDASGSSQRYVYDAAGNQTAQIDTTGGANSA
IASRTYSTGAAGQCSTKKGQVCSATDGNGNVTTYAYDSAGNLSSVMPPAPLGATTYGYDS
LGRVTSVTDGNNKTTSYQYDNADRLVKTTFANADELWASYYPNGTKAYDWDKAKYQVTYE
YDAQGLITARKLLVGPGNPSSQTITMEYDKAGNMVTYTDPSGTVAYTYNNLDLVTQLTEP
GGSCPTDPDASPTSNSKCVKFTYDANDREIKRIFPNDAYVNTYYDNAGRVTEIYAVKGLS
SGGGTGSMAMSLSGGAPSIAARSPHPASDDTVRYKYSYSAVPGSTQPTDDRSRIQQLQVI
KHTSASGAGTTTTYSYDSRGRLTQAAEMAGTTLNAQWQYAYDGANNRTQQIRTGSTGFGT
TPGTLNYTFNAANELTGVTNSVGAFSYDSTGAQTNDGRTNAPSTFNDRGGLTSVGSNSYS
SYGQGNAEPLTITNQSVSFLSSPLGVASLKNGSTGVTTAYTRLPDGSLVGQRNGAANSYY
VLDIRGSSLGRFSGTGTWSASQSYSPYGEPRSSSATGQGLGYLGSFYDPQTKQNRLGARY
YDSTVGRFSQFDPSGQESNPYAYANGDPINFSDPSGLDAVSVIVKIIDAVASGDDLLEVL
STGDLLSYATGALVEAACMVAVAAPTGGIGLAVSFGFCFLVGEVFSEAAEAIYEENS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgcgagtggtcgggctttcggtatttctggcagtgttcctggcttcgggtgtc
gccaccccgagttgggcggcggacgagcccgttccggacgagactctcgtggccgagttc
gatggctccaacgagacgttggaggacctgactgcttcgatctgggctcctcccgaggag
gccgatgaccgcgagattgaggccccagaggcgcccgatgtcttgtgggcgccggaactc
ggcggacggtatggcacggaagtggtcgagccgcagcaggtgcccctcgcacccgccgaa
tctccaggctcgggtaacacgtccgcccctcttcgcgaggcggatcccgtacccaccggt
gacgcggtcccggaacctagcggaactccaaacccggacgatgatggcgagctgacgtca
actccagacccaagctcaccctcgcttgagactgcagcaccaggcgacgatggttcggag
gacacggactcgccggactccgccggcaagcaagtctcggcactctctgctccctctggt
gttcaggtgggcgcccctggcctgggtagtctcccctcgttcggcttcaagcaaattccc
atctctgatgacactgtcattcgggtcaatctcgccaatggcaatctgttgatcaccgcg
aacgacgccaagatctccggcccgggtgttgggcttcgcatcgaccgtttctacaacggc
ctctccacggccgcgggcacgttcggtggcggatggtcgtcctccgtcgtttcgaacgat
gttggcctgctggcctcgggcaatgatcgcgttttctatgggccttcagggtttcagtct
cgattcacgtgggtgagtgccggcaactggacgacaccgccgggcatcaacgcgaccctg
actcagccagcgactacgagcgaccgctacttcttgctcacgtacaacaggaccggtgag
aagctctggttctcgcagggcggcttcttgacgggcgatttcgaccgtaacgacgtgggt
gtcagttacacgtattcgtcgggcaagctcgtcagcgccacgcaatcttcggggcgctcc
gccaccttcaactggtcggggtcatcgctgcagacgatcacggattccgccaacaggacc
acgacgttcacgaagaactcgctgagtcagctcagcaaggtgcagtcgccggacggtgct
gtgaacgagttcacgtacgattcgacgggtcgcatcaagacgatcaccgtgccatcttcg
aacccggggagcaccgtcgtcactttcacgtacgacacggcccacagagtcaagacggtg
atccagaagtccacatcacctacttggggcagcaaggcagacctcaccacgacgttcacc
tacggcagtggcgtcacttcggtgagcgacccgaagcagaacaccacgcagtacgccgtg
gacgcgcaggggctcattacctcggccaccgacccggtgggccacgtccgcagttcgcag
tacaacgcgaacggcgacgtgaccgcgactactgacgctctgggaagcggctccaccccg
ggaaatcagaccacggtgagctacgaccagctcttcaacacgactggggttcagctccca
acgggtgctgcagcgtcggccatctacgcgcaaggcatgaactgcccaactgcgtcgacg
ggtacccagttccaggtccagtgcagcatagacgcctcaggtagtagccagaggtacgtg
tacgacgcggcggggaaccagaccgcccagatcgacacgactggcggcgcgaactccgcc
atagcctcccgcacgtacagcaccggggccgctggccagtgcagcacgaagaaggggcag
gtctgctcggccaccgacggcaatggcaacgtcacgacttatgcctacgactcggctggc
aacctgtcctcggtcatgccacccgcaccgctcggggctacgacttatggttacgactct
ctcggacgcgtcacctcggttacggatggcaataacaagaccacctcgtaccagtacgac
aacgccgaccgtctcgtcaagaccacgttcgcgaatgctgacgagctctgggcgtcctac
tatccgaacgggaccaaggcgtacgactgggacaaagccaagtatcaggtgacctacgag
tatgacgcgcagggattgatcaccgcacggaagctcctcgtcggtcctgggaacccttcg
tcgcagacgatcaccatggagtacgacaaagccgggaacatggtgacctatacggaccca
tcagggactgtcgcctacacgtacaacaacctcgatctcgtgacccagctaacggagccg
ggaggctcctgcccgaccgacccggacgcctctcccacatccaacagcaaatgcgtcaag
ttcacgtacgacgccaacgaccgcgaaatcaagcgcatcttccccaacgacgcctacgtc
aacacctactacgacaatgccggccgagtcacggagatctacgccgtgaagggactgtct
tcgggtgggggcaccgggtcgatggcaatgtccctctcgggtggcgctccaagcatcgcc
gcccgcagtccgcacccggcgtctgacgacacggtgcgatacaagtactcctacagcgcc
gttccgggctccactcagcccacagacgaccgatcacgcatccagcagcttcaggtgatc
aagcacaccagcgcctccggtgcaggtaccactacgacctactcctacgactcccgaggt
cgcctcacgcaggccgccgagatggctggcaccacgctaaacgctcagtggcagtacgcc
tacgacggtgccaataaccgaacacaacagatcagaaccggcagcacggggttcggcacc
acacccggaacgctcaactacaccttcaacgcagcgaacgagctcacaggcgtcaccaac
tcggtcggcgcattcagctacgacagcaccggagcacaaaccaacgacggccggacgaac
gcaccaagcaccttcaacgaccgtggaggactgacctccgtcggcagcaactcctacagc
tcctacggtcagggcaacgccgagcctctcacgatcaccaaccagagtgtctcgttcctc
agctcaccgctcggcgtagcatcgctaaagaacggctcgaccggcgtgaccaccgcctac
acgcgactgcccgacggttccctagtcggacaacgcaacggcgctgcgaactcgtactac
gtcctcgacatacgaggctcctcactcggacgtttcagcgggactgggacgtggagcgcc
tcgcagtcctacagcccctatggcgagcctcgctcctcgagcgcgaccgggcagggtctt
ggctacctcggcagcttctacgacccgcaaaccaaacagaacagactcggggcgaggtac
tacgactcgactgtcggacggttcagtcaattcgacccgagcggccaggagtcaaaccct
tacgcctacgcgaacggcgaccccatcaacttctccgacccaagcggactcgatgccgtc
tccgtcatagtcaagatcatcgacgcggtggcgtcgggggatgatctcctggaggtgcta
tccaccggagacctgctgagctacgcgaccggagcactcgttgaagccgcatgcatggta
gcagtggccgcgccgacgggaggaataggcctcgcggtatcgttcggcttctgcttcctc
gtcggggaggtcttctccgaagcagcagaagccatatacgaggagaactcgtga
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