Halorhabdus utahensis: Huta_0083
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Entry
Huta_0083 CDS
T00971
Name
(GenBank) Transcription factor TFIIB cyclin-related
KO
K03124
transcription initiation factor TFIIB
Organism
hut
Halorhabdus utahensis
Pathway
hut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Huta_0083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hut03021
]
Huta_0083
Transcription machinery [BR:
hut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Huta_0083
Prokaryotic type
Archaeal type
TFB
Huta_0083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Trm112p
Sigma70_r4
Zn_ribbon_RRN7
Zn_ribbon_tTFIIB
DUF1272
Ribosomal_S27
A2L_zn_ribbon
Auto_anti-p27
Zn_ribbon_19
DZR_2
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
ACV10272
UniProt:
C7NNY1
LinkDB
All DBs
Position
complement(83788..84759)
Genome browser
AA seq
323 aa
AA seq
DB search
MSDTTLRSHERANQRESTTDEETKTDVCPECGGGLVTDSERGETVCGECGLVVEEDEIDP
GPEWRAFDAAEKDQKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSRQREKMQRLRT
WNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDENLLPGRSIEGV
ATASLYAAARQAGNPRSLDEIDNVSRVEKDEVARTYRYVVRELKLEVKPADPTSYVPRFA
SDLELTEEAERHARDLLENAKQEGVHSGKSPVGLAAAAIYAASLLANEKVTQNEVSEVAN
ISEVTIRNRYHELLEAKQDIRTA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatacgaccctcagaagccacgagagagcgaatcagcgcgagagtaccaccgac
gaggaaacaaagacggacgtctgtccggagtgcggtggcggcctggtaacggattccgag
cgcggcgagacggtgtgtggtgagtgtggcctcgtcgtcgaggaggacgagatcgatccc
ggccccgagtggcgggcgttcgacgccgccgagaaggaccagaagtcccgtgtcggtgca
ccgacgacgaacatgatgcacgacaagggactctcgacgaacatcggctggcaggacaag
gatgcctacggcaactccctgtcctcgcgccagcgcgagaaaatgcagcggttgcgcacc
tggaacgagcgcttccgaacccgcgattccaaagagcgcaatctcaagcaggccctcggc
gagatcgaccgcatggcaagcgcgcttggtctccccgagaacgttcgcgagacggcaagt
gtgatctatcgccgtgcgctggacgagaacctcctccccggacgctccatcgagggcgtc
gccaccgcatcgctctatgcggccgcccgccaggccggcaacccgcgtagcctcgacgaa
atcgacaacgtctcgcgagtggagaaagacgaagtcgcccggacgtatcgatacgtcgtc
cgcgaactgaaactggaagtcaagcccgcggacccgacgagttacgtcccgcggttcgcc
tcggatctcgaactcacggaggaagccgagcgacacgcccgtgatctcctggagaacgca
aagcaggagggagtccattccgggaaaagtccggtcggcctcgccgcggctgcgatctac
gcggcctcgttgctggcaaacgagaaggtaacgcaaaacgaggtcagcgaggtcgcgaac
atctccgaggtcacgatccgcaaccggtatcacgaactgctggaagccaaacaggacatc
cggacggcctga
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