Halorhabdus utahensis: Huta_0186
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Entry
Huta_0186 CDS
T00971
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hut
Halorhabdus utahensis
Pathway
hut04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Huta_0186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hut03019
]
Huta_0186
03009 Ribosome biogenesis [BR:
hut03009
]
Huta_0186
04131 Membrane trafficking [BR:
hut04131
]
Huta_0186
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hut04147
]
Huta_0186
Messenger RNA biogenesis [BR:
hut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Huta_0186
Ribosome biogenesis [BR:
hut03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Huta_0186
Membrane trafficking [BR:
hut04131
]
SNARE
SNARE associated proteins
Others
Huta_0186
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Huta_0186
Exosome [BR:
hut04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Huta_0186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_2
AAA_22
AAA_5
AAA_14
TIP49
AAA_33
nSTAND3
NPHP3_N
RNA_helicase
AAA_28
AAA_7
IstB_IS21
Mg_chelatase
AAA_18
DUF815
AAA_3
AAA_lid_PRS2_C
NB-ARC
ABC_tran
TsaE
Parvo_NS1
AAA_17
Sigma54_activat
ATPase
AAA_24
AAA_30
AAA_11
SLFN-g3_helicase
AAA_19
NACHT
PhoH
Zeta_toxin
NTPase_1
bpMoxR
ATPase_2
Bac_DnaA
ATP-synt_ab
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
ACV10374
UniProt:
C7NPS7
LinkDB
All DBs
Position
complement(183980..186244)
Genome browser
AA seq
754 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRAAMEQLDLENGDYVVLEGREGRAVARVWPGYPEDTGDG
VVRIDGQLRQEADVGIDDRIDVEKADVKPARSISVALPQNLRVRGNIGPHVRNKLSGQAV
TTGQTVPFSLGLGPVSSVGGQKIPLKIAETDPEGTVVVTEQTEIEVSQQPAEQITGEAPE
DARGTPDVTYEDIGGLDDELEQVREMIELPMRHPELFNQLGIEPPKGVLLHGPPGTGKTL
MAKAVANEIDAYFTTISGPEIMSKYYGESEEQLREMFDEAEENAPAIVFIDEIDSIAPKR
DDTSGDVERRVVAQLLSLMDGLEERGDVIVIGATNRLDALDPALRRGGRFDREIEIGVPD
KKGRKEVLQVHTRGMPLNDGIDIDEYAERTHGFVGADLEQLAKEGAMNALRRIRPEIDLE
ADEIDAEILESLEITEDDFKAALKGIEPSALREVFVEVPDVSWEDVGGLEDTTERLRETI
QWPLEYPGVFEQMDMESAKGVLLYGPPGTGKTLLAKAVANEAQSNFISVKGPELLNKYVG
ESEKGVREVFSKARENAPTVVFFDEIDSIAGERGRNMGDSGVGERVVSQLLTELDGLEDL
EDVVVIATTNRPDLIDAALIRPGRLDRHIHVPVPDEDARRKILEVHTRDKPLAESVDLDD
LARRTDGYVGADLEAVAREAAMAATREFIRSVDPEDVDDSVGNVLIDESHFETALGEVQP
SVDREVRERYEEIEQRFDKRETELDEPEVGKTFQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccgtcaaaccactcaaacagaaggacgccggtcgtgggctggccgcgatc
gatcgggcggcgatggagcaactcgacctggagaacggcgactacgtcgttctcgagggg
cgcgagggacgggctgttgcccgtgtctggcccgggtatcccgaggacaccggcgacggc
gtcgtccggatcgacgggcagctccgacaggaagcggacgtcggcatcgacgaccggatc
gacgtcgagaaggccgacgtcaaacccgcccgctcgatctcggtcgcccttccccagaac
ctccgcgtccgcggaaacatcggcccgcacgtccggaacaagctctccgggcaggcagtc
acgacaggccaaactgtgccgttctcgctcgggctcggcccggtctccagtgtcggtggc
cagaagatcccgctgaagattgccgagaccgatcccgaggggacggtcgtcgtcaccgag
caaaccgagatcgaggtcagccaacagcccgccgagcagatcaccggcgaggcacccgag
gacgcccgcgggacgcccgacgtgacctacgaggacatcggcgggctcgacgacgagcta
gagcaggtccgggagatgatcgagttgccgatgcgccaccccgagctgttcaaccagctg
ggcatcgagccgccgaagggcgtcctcctgcacgggccgcccggcaccggcaagacgctg
atggccaaagccgtcgccaacgagatcgacgcctacttcaccacgatctcgggcccggag
atcatgtcgaagtactacggcgagagcgaagagcagttgcgggagatgttcgacgaggcc
gaggagaacgccccggcgatcgtcttcatcgacgagatcgactccatcgcccccaagcgt
gatgacacgagcggcgatgtcgaacgccgcgtcgtcgcccaactcctcagcctcatggac
ggcctcgaggagcgcggcgacgtgatcgtcatcggcgcgaccaaccgacttgatgcgctc
gaccccgccctccgtcgtggcggtcgcttcgatcgcgagatcgagatcggggtgcccgat
aaaaagggtcgcaaagaagtcctgcaggttcacacccgcgggatgccgttgaacgacggg
atcgacatcgacgaatacgccgaacggacccacggcttcgtcggtgcggacctcgaacaa
ctcgccaaagagggggcgatgaacgcgcttcgccggatccgtccggagatcgatctcgaa
gccgacgagatcgacgccgagatcctcgaatccctggaaatcactgaagacgatttcaag
gcggcactgaaggggatcgaaccctcggcgctccgggaagtgttcgtcgaggtgcccgac
gtctcctgggaagatgtcggcgggctcgaagacaccaccgaacgcctcagagagaccatc
cagtggcccctggagtaccccggcgtcttcgagcagatggacatggagtccgccaagggc
gtgctgctctatggcccaccaggcacggggaagacgctgctcgccaaggccgtcgccaac
gaggcccagagcaacttcatctccgtgaaggggccggaactcctcaacaagtacgtcggg
gagtccgagaagggcgtccgcgaagtcttctcgaaggcgcgtgagaacgcacccacggtg
gtgttcttcgacgagatcgactcgatcgcgggcgagcgggggcgcaatatgggcgattcg
ggcgtcggtgaacgcgtcgtctcccaactgttgaccgaactcgacgggctcgaggatctg
gaggacgtcgtcgtgatcgccaccacgaaccgcccggatctcatcgacgccgcgctcatc
cgacccggtcgactcgaccgacacatccacgtccccgtgcccgacgaggacgcgcgccgg
aagatcctcgaggtgcacacgcgggacaagccgctcgccgagagcgtggacctcgacgac
ctggcgcgccggaccgacggctacgtcggtgccgatctggaggccgtcgcccgcgaggct
gcgatggccgccacgcgtgagttcatccggagcgtcgatcccgaagacgtcgacgacagc
gtcgggaacgtcctgatcgacgagagccacttcgaaaccgcgctcggagaagtccagccg
agcgtcgaccgcgaggtccgcgagcgctacgaggagatcgaacagcgcttcgacaaacgc
gagactgaactcgacgaacccgaggtcggcaagaccttccagtga
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