Halorhabdus utahensis: Huta_0317
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Entry
Huta_0317 CDS
T00971
Name
(GenBank) putative PAS/PAC sensor protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hut
Halorhabdus utahensis
Brite
KEGG Orthology (KO) [BR:
hut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hut03000
]
Huta_0317
Transcription factors [BR:
hut03000
]
Prokaryotic type
Helix-turn-helix
Other families
Huta_0317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
PAS_9
HTH_10
PAS
PAS_4
Response_reg
GAF_2
PAS_3
GAF_3
PAS_8
GAF
AfsA
Motif
Other DBs
NCBI-ProteinID:
ACV10504
UniProt:
C7NQP5
LinkDB
All DBs
Position
complement(304624..306666)
Genome browser
AA seq
680 aa
AA seq
DB search
MSSSGDGRRILRVGDDPGASPVSTDGLREMADNVVVESSTDFRTAVERVEADEADCVVVD
HTESGFDGLALLEAIRQDRPGLPVVVIPSVSTGAIARRAVAADATAYVPQTSDDALGLVV
EAIDDAVPEPDRRDRQVRMPISDRTATEQQRLKERALDEAPVGITIADATAPDKPLIYVN
DSFVEMTGYEKEDAIGVNCRFLQGEGTDAETTLELREAVMDEQAAAVELRNYRADGSTFW
NNLEISPIRDDDGTVTNFVGFQQDITERKEAEAAIKRERETLRRLLERVEGLVGDVTEIL
VRADSRADIDRMTVERVGAGDEFDRAWIGEYDPPSETITITEDSHTDTESVTLDLTDAAA
GSAIDVVATAVDRGEVQRFEDADLESPVGGVDGSTVSDGDGLTGSGVVIPLVYRETTYGV
LVVYDRDPDAFDETERTILAALGRAIGSAVNAVLSKRTVTTDATVEITVSLHGPDLLLAT
LAGRLDGALAYRGAQATDDGRVRFLFHIDADDEASLREAAERDERVSAVTVLSRTDDDCV
IEITTDGTPFVRILSGYGGDIQDISVDDDGIELAFQVATEQNGRAIVEEHRSTYETATLV
SYTESDDPGETPQAFRSAVESELTDRQLTALEKAYVSGFFEWPRESEGEELADSMGVVPS
TYYQHLRAAEKKLVRAFFDS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttcaggggacggtcggcgaatactccgggttggggacgatccaggggcgtcg
ccggtctcgacggacgggctccgggagatggcggacaacgtcgtcgtcgaatcgtcgacc
gacttccgtacggcagtcgaacgggtcgaagccgacgaggcagactgcgttgtcgtggac
cacaccgagtcgggattcgacggactggcgctcttagaggcgatccgtcaggatcgaccg
ggattgccggtcgtcgtcatcccgagcgtttcgacgggggccatcgctcgtcgggcagtg
gccgccgatgcgaccgcctatgtcccccagacgagtgatgacgccctcggtctcgtggtc
gaagccatcgacgacgccgtccccgaacctgatcgtagggaccgacaggtacggatgccg
atcagcgaccgcacggcgaccgaacaacagcgcctgaaagagcgtgccctcgatgaagcc
ccagtcgggatcacgatcgcggacgcgacggcacccgacaagccgctgatctacgtcaac
gactccttcgtggagatgacgggctacgagaaggaggacgcgatcggggtcaactgtcgg
ttcctccagggcgaagggaccgacgccgagacgaccctggaactccgggaagccgtgatg
gacgagcaagcggctgcagtcgagttgcggaactaccgtgccgatggctcgaccttctgg
aacaacctcgagatttcgccgatccgggacgacgacggaacggtgactaacttcgtgggg
ttccagcaggatatcaccgagcgcaaggaggcggaggcggcgatcaaacgtgagcgggag
accttacggcggctgctggagcgcgtcgaggggctcgtcggcgacgtgactgagattctg
gtcagggccgattcgcgagcggatatcgacagaatgactgtcgaacgggtcggggccggc
gacgaattcgatcgtgcgtggatcggggagtacgacccgccatccgagacgatcacgatc
accgaagacagccacacggacaccgagtccgtcacgctcgatctcactgacgcggcggcc
ggatctgccatcgacgtggtcgcgacggccgtggaccggggggaggtccaacggttcgag
gacgctgacctggaatcccccgtcggtggagtggacggatcgacggtttcggacggggac
ggactgactggttctggagtggtgatcccgctggtttatcgagagacgacctacggggtc
ctcgtcgtctacgaccgcgatccggacgccttcgacgaaaccgaacggacgatactcgcc
gctctcggtcgggcgatcgggtcagctgtcaacgccgtcctgagcaagcggaccgtgacg
accgatgccaccgtcgaaatcacggtctcgttgcacgggccggatctccttttggctacc
ctcgccgggcgactcgatggtgccctcgcgtaccgtggtgcgcaggcgaccgacgacggg
cgggtgcggtttctgttccatatcgacgcggacgacgaggccagcctccgcgaggcggcc
gagcgggacgaacgggtttctgccgtgaccgtcctctcacggacggacgacgattgtgtg
atcgaaatcacgaccgacgggacgcccttcgtcaggatcctgtccggatacggcggcgac
atccaggacatttccgttgacgacgacgggatcgaactcgcctttcaagtcgcgaccgaa
cagaacggtcgggcgatcgtcgaggaacaccggtcgacctacgagacagcgacgctggtc
tcctacactgaatccgacgacccgggcgagacaccccaggcgtttcggagtgctgtcgag
tccgaactgaccgaccggcagttgactgccctcgaaaaagcctacgtgagcgggttcttc
gagtggccacgtgagagcgagggtgaggaactcgccgactcgatgggagtcgttccctca
acgtattaccagcatctccgggcggccgaaaagaaactcgtccgggcttttttcgactcc
tga
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