KEGG   Halorhabdus utahensis: Huta_0549
Entry
Huta_0549         CDS       T00971                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hut  Halorhabdus utahensis
Brite
KEGG Orthology (KO) [BR:hut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hut03400]
    Huta_0549
Enzymes [BR:hut01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Huta_0549
    5.6.2.6  RNA 3'-5' helicase
     Huta_0549
DNA repair and recombination proteins [BR:hut03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Huta_0549
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WHD_Lhr ResIII AAA_25 Cas3-like_C_2 DEXQc_Suv3 HypA DmmA-like_C
Other DBs
NCBI-ProteinID: ACV10736
UniProt: C7NSS5
LinkDB
Position
553839..556670
AA seq 943 aa
MSEATREGDAVFAHLGDAVRSALSDRGFTTPTEPQRRAIPPIADGEDALVIAPTGSGKTE
TAMLPVFDAIEGDPPDGIAALYVTPLRALNRDMRDRLEWWGETLDLEIDVRHGDTTQYRR
QQQAEDPPDVLVTTPETVQAILTGEKLREGLADVAHVVVDEVHELAAAKRGAQLTVGLER
LRDLAGPFQRIGLSATVGDPAEVGRFLTGDRGCSIVEIDAGSDIEIDVVRPSIEERDENV
AGEIVTDAEVASHVRQIDELIETHESTLVFVNTRQTAEALGSRLKEYGTDVGIHHGSLAS
DTRVEVEDAFKAGDLDALLCTSSMELGIDVGRVDHVVQYNSPRQVSRLLQRIGRAGHRRD
RTSAGTIVTTSPDETFEALAIARMARAGEVEPAAIHHGSRDTVANQIAGVVMDLGEVDAR
RAYEIVTRAYPFGDISEAVFREIVRELADNRVIWLEEDDDELSKRRGTWQYFYHNLSMIP
DEATYDVADGTSGRQVGTLDERFVVNFAAPGEVFIQAGEMWRITEIDEDEETVHVTPVGD
PAGEVPSWTGQEIPVPYDVAQEVAELRGVAAEQLRAGGEPESVARHLAGRYDAAEATIRS
ALEQIEYHEGPVPGPNRIVVEFEGRDVVLNAAFGHKVNETLGRLLSALLGQRTGSSVGLD
VDPYRISLEVPRNVTAGDVVDVLESTDPAHVEGLIELSLKNAGALKFRLAQVATKFGALK
NWRGRGSNRFGRDRLLEALEGTPIYDEALRELIHEKLDIDRASELLREIQSGDIVVETVG
GRTAIGRGGRSGSKELLAPENADASVIQTLKDRIQEDRVILFCVHCESYKTTKPVKRVRD
QPKCPECGSTRIAALNPWDEETVTAVKTDEKDDEQERRTKRGYQAADLVQSHGKQAIIAL
AGRGVGPTNAARIINKLRENEDDFYRDILAREREYARTRSFWE
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgagcgaggcgacgcgcgagggtgacgccgtcttcgcccacctcggcgacgccgtccgg
tcggcactgtccgaccgcggctttacgacgcccaccgagccacagcgtcgcgcgatcccg
ccgatcgccgacggtgaggacgcgctggtgatcgccccgaccggcagcggcaagaccgag
actgcgatgctcccggtcttcgacgcgatcgaaggcgatccacccgacggcatcgccgcg
ctgtacgtcacgccgctgcgggcactcaatcgcgacatgcgggatcgcctggagtggtgg
ggtgagacacttgacctcgagatcgacgtccgccacggcgacacgacccagtatcgtcgc
cagcaacaggccgaggatccgccggacgttctggtcaccacgcccgagaccgtgcaggcg
atcctgaccggtgagaagcttcgggagggactcgcagacgtcgcccacgtcgtcgtcgac
gaggtccacgaactcgcggccgcaaaacgcggcgcgcagttgaccgtcggcctcgaacgg
ctccgggacctcgccggcccgttccagcggatcgggctttcggcgaccgtcggcgatccc
gcggaagtcgggcggtttctcacgggcgatcggggatgttcgatcgtcgagatcgacgcc
ggcagcgacatcgagatcgacgtcgtccgcccttcgatcgaagagcgcgacgagaacgtc
gccggcgagatcgtcaccgatgccgaggtcgccagtcacgtcaggcagatcgacgaactg
atcgaaacccacgagtcgacgctggtgtttgtcaacacccgacagacggccgaagcgctg
ggctcgcgactcaaggaatacggcacggacgttggcatccaccacgggtcgctggcctcg
gacactcgcgtcgaggtcgaggacgcgttcaaggcgggcgacctggacgcgttgctgtgt
acctcctcgatggagctcgggatcgacgtcgggcgtgtcgatcacgtcgtccagtacaac
agcccccggcaggtctcccggttgctccagcgcatcgggcgggcgggccatcgccgggat
cgaacgtccgcagggacgatcgtcacgacgagccccgacgagaccttcgaggcgctcgcc
attgcgcgaatggcccgggccggcgaggtcgaaccggcagcgatccaccacgggagtcgg
gacaccgtggccaatcagatcgcgggcgtcgtcatggacctgggagaggtcgacgcccgc
cgcgcctacgagatcgtcacgcgggcgtacccctttggcgatatttccgaagctgtcttc
cgggagatcgtgcgtgaactcgccgacaatcgcgtcatttggctcgaggaagacgacgac
gagctctcgaaacgccgggggacctggcaatacttctatcacaacctctcgatgatcccc
gacgaggcgacctacgacgtcgccgacggcacgagcggccggcaggtcgggacgctggac
gaacgcttcgtcgtcaacttcgccgcgccgggggaggtgttcatccaggccggcgagatg
tggcggatcaccgagatcgacgaggacgaggagacggtccacgtcacgccggtcggcgac
ccggccggcgaagttccctcctggaccggccaggagatcccggtgccctacgacgtagcg
caggaagtcgccgagctccggggggtcgcggccgagcaactccgggctgggggcgagccc
gaaagcgtcgcccggcaccttgctggcagatatgatgccgccgaggcgacgatccgctcc
gcgctcgaacagatcgaatatcacgagggaccggtgcccggcccgaatcggatcgtcgtc
gagttcgaggggcgggacgtcgtgcttaatgctgccttcggccacaaggtcaacgagaca
ctcggtcgactcctctcggcactgctcggccagcgtacgggctcgtcggtcggcctcgac
gtcgacccgtaccggatttccctggaggtgccacgcaacgtcaccgccggcgacgtcgtc
gacgtactcgaatcgaccgatcccgctcacgtcgaggggttgatcgaactcagtctgaag
aacgccggcgcgctgaagttccgactcgcgcaggtcgccaccaagttcggcgcgctcaag
aactggcgtgggcgagggagcaaccgcttcggacgggatcggctgctcgaagcactcgag
gggacgccgatctacgacgaagctctccgggagttgatccacgagaaactcgacatcgac
cgggcgagcgagttacttcgggagatccagtcgggcgacatcgttgtcgagactgtcggc
ggccggacggcgatcggtcgcggcggccgctcgggcagcaaggaactcctcgcccccgag
aacgccgacgcgagcgtgatccagacgctgaaagaccggatccaggaggaccgcgtcatc
ctgttctgcgttcactgtgagtcctacaaaaccaccaaaccggtcaagcgagtgcgcgac
cagccgaaatgcccggagtgtggctcgacccggatcgcggcattgaacccctgggacgag
gagaccgtcacggcagtcaagaccgacgagaaagatgacgagcaggaacgacggacgaaa
cgcggctaccaggccgcggatctcgtccagagccacggcaaacaggccatcatcgcgctg
gcagggcgcggcgtcgggccgacgaacgcggcccgcatcatcaacaaactccgggagaac
gaggacgatttctaccgggatatcctcgcccgggaacgcgagtacgcccggacgcggtcg
ttctgggagtga

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