Halorhabdus utahensis: Huta_0554
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Entry
Huta_0554 CDS
T00971
Name
(GenBank) Transcription factor TFIIB cyclin-related
KO
K03124
transcription initiation factor TFIIB
Organism
hut
Halorhabdus utahensis
Pathway
hut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Huta_0554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hut03021
]
Huta_0554
Transcription machinery [BR:
hut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Huta_0554
Prokaryotic type
Archaeal type
TFB
Huta_0554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
HTH_24
Zn_ribbon_RRN7
BRF2-like_C_cyclin_rpt
Sigma70_r4
Cyclin_C
Zn_ribbon_tTFIIB
DUF1272
Zn_ribbon_TFIIB
Ribosomal_S27
A2L_zn_ribbon
Auto_anti-p27
Zn_ribbon_19
DZR_2
Motif
Other DBs
NCBI-ProteinID:
ACV10741
UniProt:
C7NST0
LinkDB
All DBs
Position
560478..561470
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AA seq
330 aa
AA seq
DB search
MSETSTRSRPTERTSERKTDEKVEHEETKTDVCPECGGGLVTDSERGETVCGECGLVVEE
DEIDPGPEWRAFDAAEKDQKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSRQREKM
QRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDENLLPGR
SIEGVATASLYAAARQAGNPRSLDEIERVSRIGRMELTRTYRYVVRELNLEVQPADPESY
VPRFVSDLELNEEVSRRARELVDSARKEGVLSGKSPVGIAAAAIYAAALLSNERVTQGEI
SEVADISEVTIRNRYKELLEAKSVDGTRVQ
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacatcaacccggtcacgaccaacagagcgaactagcgaacgcaagactgac
gaaaaagtcgagcacgaggaaacaaagacggacgtctgtccggagtgcggtggcggcctg
gtaacggattccgagcgcggcgagacggtgtgtggtgagtgtggcctcgtcgtcgaggag
gacgagatcgatcctggccccgagtggcgcgcgttcgacgccgccgagaaggaccagaag
tcccgtgtcggtgccccgacgacgaacatgatgcacgacaagggactctcgaccaacatc
ggctggcaggacaaggacgcctacggcaactccctctccagccgccagcgcgagaagatg
cagcggttgcgcacctggaacgagcgcttccgaacccgcgattcaaaggaacgcaatctc
aagcaagccctcggcgagatcgaccgcatggcaagcgcgcttggtctccccgaaaacgtt
cgggagaccgccagcgtcatctatcgccgtgcgctggacgagaacctcctccccggacgc
tccatcgagggcgtcgccaccgcatcgctctatgcggccgcccgccaggccggcaacccc
cgcagtctcgacgaaatcgagcgcgtctcccggatcggccggatggaactcacgcggacg
tatcgatacgtcgtccgcgaactgaacctggaagtacagccagccgatcccgagagctac
gtcccacggttcgtctccgacctcgaactgaacgaagaagtatcccggcgagcccgcgaa
ctcgtcgattcagcccgaaaagagggggttctcagcgggaagagtcccgtcgggatcgcc
gccgccgcgatctatgcagcagccctcttgagcaacgaacgagtgacccagggtgagatt
tcggaggtggcagacatctcagaggtcacgatccggaatcgctacaaggaactcctcgag
gcaaaatcagtcgacggcacgcgagtacagtga
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integrated database retrieval system
