Halorhabdus utahensis: Huta_1002
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Entry
Huta_1002 CDS
T00971
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hut
Halorhabdus utahensis
Brite
KEGG Orthology (KO) [BR:
hut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hut03016
]
Huta_1002
Enzymes [BR:
hut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Huta_1002
Transfer RNA biogenesis [BR:
hut03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Huta_1002
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
ACV11185
UniProt:
C7NVA1
LinkDB
All DBs
Position
complement(967548..968105)
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AA seq
185 aa
AA seq
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MGKRLFVSIDLDGLAEALAAVQDRFEGASGLNFVDPEGAHVTLKFLGDTDPDRLPELTDE
LTAAVEESGVAPFEARFGGLGAFPSEEYITVVWVGVREGGPAMTALHEAIEDRTVAMGFD
PEDHEFTPHVTIARMDHAGGKEQVQTVLREADPTVGTLDVTEVRLTESVLTDGGPEYSTL
ESFEL
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcgactgttcgtcagcatcgatcttgacggcctcgccgaggcgctcgcggcc
gtccaggatcgcttcgagggtgcttcgggcctgaacttcgtcgatcccgagggggcccac
gtcacgctgaagttcctcggtgacaccgatccggaccgcctccccgaactcaccgatgaa
ctcaccgcggcagtcgaagagagcggcgtcgcccccttcgaggcccgatttggtggcctc
ggcgcgttccccagcgaggagtacatcaccgtcgtctgggtcggcgtccgcgagggcggc
ccggcgatgacagccctccacgaagccatcgaggaccgaaccgtcgcgatgggctttgac
ccggaagaccacgagttcacgccccacgtcaccatcgcccggatggaccacgctggcggg
aaggagcaggtccagaccgtccttcgcgaggcagatccgaccgtcggaaccctcgacgtt
accgaggtccgcctgaccgagagcgtcctcaccgacggtggccccgaatattcgacgctc
gaatcgttcgaactgtga
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