Halorhabdus utahensis: Huta_1187
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Entry
Huta_1187 CDS
T00971
Name
(GenBank) Transcription factor TFIIB cyclin-related
KO
K03124
transcription initiation factor TFIIB
Organism
hut
Halorhabdus utahensis
Pathway
hut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Huta_1187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hut03021
]
Huta_1187
Transcription machinery [BR:
hut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Huta_1187
Prokaryotic type
Archaeal type
TFB
Huta_1187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Anti-TRAP
Cyclin_C
Sigma70_r4
HTH_Tnp_ISL3
A2L_zn_ribbon
DZR_2
Trm112p
Motif
Other DBs
NCBI-ProteinID:
ACV11363
UniProt:
C7NMQ0
LinkDB
All DBs
Position
complement(1160794..1161765)
Genome browser
AA seq
323 aa
AA seq
DB search
MSETNTRTRLDQSTNVTEDEAETSDVQCPECDGKLISDTERGETVCQGCGLVVEEDEIDP
GPEWRAFDAKEKDQKSRVGAPTTNMMHDKGLSTNIDWRDKDAYGNSLGSRQREKMQRLRK
WNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIEGV
STASVYAAARQAGVPRSLDELTDVSRVEKDEIARTYRYVVRELGLEVRPADPESYVPRFT
SDLELSEEAERRARELLANAKEEGVHSGKSPVGLAAAAIYAASLLTNEKTTQAAVSEVAD
ISEVTIRNRYHELLEAEQSIPTA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaccaacaccagaacccgactcgatcagtcgacgaacgtcacagaagacgaa
gcagagacctcggacgtccagtgtcccgagtgtgacggcaaactcatttcggacaccgag
cgtggcgagaccgtctgccagggatgcggactcgtcgtcgaggaagacgagatcgatccc
ggtccggagtggcgcgcgttcgacgccaaggagaaagaccagaagtcccgcgtcggtgcc
ccgacgacgaacatgatgcacgacaaggggctgtcgaccaacatcgactggcgtgacaag
gacgcctacggcaactcgctggggtcgcgccagcgtgaaaagatgcagcgcctccggaag
tggaacgagcgcttccggacgcgtgactccaaggagcgcaacctcaagcaggcgctgggc
gagatcgaccgcatggcaagcgcgcttggactcccggagaacgttcgcgagaccgcgtcg
gtcatctatcggcgggcactcgacgaggatctgctccccggtcgatccatcgaaggtgtc
tcgacggcatccgtctacgctgccgcccgtcaggctggcgtcccgcgaagcctggacgaa
ctcaccgacgtctcccgggtcgagaaagacgagatcgcccgcacgtatcgctacgtcgtc
cgtgaactcggcctcgaagtccgcccggccgatcccgagagctacgtcccacggttcacc
tcggatctcgagctgagcgaggaggccgagcgccgtgcgcgagaactgctcgccaacgcc
aaagaggagggcgtccactccggaaagagccctgtcgggctcgcggccgccgcgatctac
gccgcctcgctgttgaccaacgagaagaccacccaggctgcagtcagcgaggtcgcggac
atctccgaagtcacgatccgcaaccgctaccacgaactgctggaagccgagcagtcgatc
ccgaccgcctga
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