Halorhabdus utahensis: Huta_2247
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Entry
Huta_2247 CDS
T00971
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K07466
replication factor A1
Organism
hut
Halorhabdus utahensis
Pathway
hut03030
DNA replication
hut03420
Nucleotide excision repair
hut03430
Mismatch repair
hut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Huta_2247
03420 Nucleotide excision repair
Huta_2247
03430 Mismatch repair
Huta_2247
03440 Homologous recombination
Huta_2247
03460 Fanconi anemia pathway
Huta_2247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hut03000
]
Huta_2247
03032 DNA replication proteins [BR:
hut03032
]
Huta_2247
03400 DNA repair and recombination proteins [BR:
hut03400
]
Huta_2247
Transcription factors [BR:
hut03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Huta_2247
DNA replication proteins [BR:
hut03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Huta_2247
DNA repair and recombination proteins [BR:
hut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Huta_2247
MMR (mismatch excision repair)
Huta_2247
DSBR (double strand breaks repair)
HR (homologous recombination)
Huta_2247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_Ssb-like
Motif
Other DBs
NCBI-ProteinID:
ACV12414
UniProt:
C7NV02
LinkDB
All DBs
Position
2295477..2296937
Genome browser
AA seq
486 aa
AA seq
DB search
MGAIEDVYADLDADVSEDDFREAVEEKVEQMGGLADEETAAMLIAHELTENEAQTVADVQ
AGMEEVRFLAKVLSIGELRTFERDGDDEDGRVINVEAADETDSLRLTFWDGEAVAVDEGE
VEVGDVLRVKGRPQEGYNGLEVSVDQAEQDLDATIDVEPGDGETIDALTMGQSNVTVEGV
VLDTEPVRTFERDDGSEGRVANLSIGDETGRVRVTLWDDRADRVEEIDAGTTVEVVDGYV
RERDGDLEVHVGEEGAIDELDDADVEYAPETTPIDDVELDETVDIGGVVRSTDPTRTFDR
DDGSEGQVKNIRIQDDTDDIRVALWGEKADRDLAPGDEVVCADVEIQDGWQDDLEASAGW
GSTVVVLEDGASMATTPDADDAGTAGENNVQDAGASTGLSAFADDGEGGETASDGTGGST
AGAEDGTADGEEVEFTGTVVQTGDPVIVDDGEQTVTVDTTESVRLGEEVTVRGRRRGDEI
EAEELF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgatagaggacgtatacgcggatctcgacgccgatgtctccgaggacgacttc
agggaagccgtcgaggagaaggtcgaacagatggggggactggccgacgaggaaacagcg
gcgatgctgatcgcccacgaactcaccgagaacgaggcccagacggtcgcggacgtccag
gccggcatggaggaggtccggtttctggcgaaggtgctttcgatcggcgagttgcggacc
ttcgagcgtgatggcgacgacgaggacggccgcgtgatcaacgtcgaggcggccgacgag
accgacagcctccgactgacgttctgggatggggaagctgtcgccgtcgacgagggggaa
gtcgaagtcggcgacgtcctccgggtcaaaggtcggccacaggagggctacaacggtctc
gaggtcagcgtcgatcaggccgaacaggatctcgacgcgacgatcgacgtcgaacccggt
gacggcgagaccatcgacgcgctcaccatgggccagtcgaacgtcaccgtcgagggcgtc
gtcctcgacaccgaaccggtgcggacgttcgagcgcgacgacgggtcggagggccgggtc
gcgaatctctcgatcggcgacgagaccggccgcgtccgggtgacgctgtgggacgaccgc
gccgaccgggtcgaggagatcgacgccggtacgacggtcgaagtcgtcgacggctacgtt
cgggaacgcgacggcgatctggaggtccacgtcggcgaggagggggcgatcgacgagctt
gacgatgccgacgtcgaatacgcgccggagacgacgccgatcgatgacgtggaactggac
gagacggtcgacatcggcggcgtcgtccgctcgaccgatccgacgcggacgttcgaccgc
gacgacggctcggaggggcaagtcaagaacatccggatccaggacgacaccgacgacatc
cgggtggcgctgtggggcgagaaagccgaccgcgacctcgcgccgggtgacgaggtcgtc
tgtgccgacgtcgagattcaggacggctggcaggacgatctcgaggcctccgcgggctgg
ggatcgacggtcgtcgtcctcgaggacggtgcgtcgatggcgacgacccccgacgcggac
gatgcaggcactgcgggcgagaacaatgtccaggacgcgggcgcgtcgaccgggctctcg
gcgttcgcagatgacggcgagggcggagagacagcgagcgacggcacgggcgggagtact
gcgggtgcggaagacgggacggcggacggcgaggaggtcgagttcacgggcaccgtcgtc
cagacgggcgatccggtgatcgtcgacgacggcgaacagaccgtcactgtcgatacgacc
gagtcggtccgtctcggggaggaagtcacggtcagggggcggcgacgcggcgacgagatc
gaggcagaggaactgttttga
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