Halorhabdus utahensis: Huta_2465
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Entry
Huta_2465 CDS
T00971
Name
(GenBank) helicase c2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hut
Halorhabdus utahensis
Pathway
hut03022
Basal transcription factors
hut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Huta_2465
09124 Replication and repair
03420 Nucleotide excision repair
Huta_2465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hut03021
]
Huta_2465
03036 Chromosome and associated proteins [BR:
hut03036
]
Huta_2465
03400 DNA repair and recombination proteins [BR:
hut03400
]
Huta_2465
Enzymes [BR:
hut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Huta_2465
Transcription machinery [BR:
hut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Huta_2465
Chromosome and associated proteins [BR:
hut03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Huta_2465
DNA repair and recombination proteins [BR:
hut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Huta_2465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
ResIII
DEAD_2
DEAD
PhoH
AAA_22
nSTAND_NTPase5
AAA_30
AAA_11
Mg_chelatase
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ACV12629
UniProt:
C7NMJ0
LinkDB
All DBs
Position
complement(2539582..2542002)
Genome browser
AA seq
806 aa
AA seq
DB search
MGTREETDATWQELFGFGQPYDDQADAIEAAIAAGRRQGFLAMEGPCGTGKTMAALTAGA
TLVREDEYERVLVVTPVKQQRRQFVADLRQLNAGLDEPLAGIALVGKRDLCPYGREDVFP
PDASVHDRCEELRENTADLVESDGSSDDRPVADAVIRPRNDDIWWDPQTGSDLAKAARPG
GVGQQAVAGTLTTAGTESPYRRTQPTAPDEIGGEDPPLYCPFEADWFARNKGSPIGFAAG
EDSVVTAAEYLPGAVERGTCPHRAMQTLVGAAAVVIGNYNHLFDPASRALIEPILDERTF
VIVDEAHRLEGRVRDLLSDRLGRQTIVQARNDCHQLRSMARQSPDHKREVRAHLGSQDVP
LEAVDRARDFYDDLLDWLDDRIAAHLDDEVGRSWRADDAALPEHDLEIPLRDPDEPEPDE
LTRWAEQAGYDGDLFRQLDTIGLAVEDASEELGVGRTPVVGAAGVIMRRWWEHDHATTFR
EIELDHSPRDDQRIEGWRATYTAGLTLFDCLPAEALARTFEDVGGGVLMSATLEPLDVFT
RVSGLDTLEEWDDDRDEHDGRPVLTRSYGLSFPPANRASWIVDATPFTARNRGDPATMEP
LGTEWNPTRDEYAHVLRAIARNPGNVLIAMPNYREATWAGAYLDDAVEKPVLVDESSSSE
ATEDLKRDFFAGEGKVLVTSTRGTLTEGVDYDGAKLRAAAVVGVPLVNIGSPRVRAVQRA
YGDVFGEDHAFEYALTIPAVRRARQAIGRVIRGAEEVGVRALVGARYTPEARHSVYGYLS
PAEREEFVTMSSEFLPDQIDRFWAER
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgcgggaggaaacagacgcgacctggcaggaactgttcgggttcggccagccc
tacgacgaccaggccgacgcgatcgaggcggcgatcgcggccgggcgcaggcagggcttc
ctagcgatggaagggccctgtgggaccgggaagacgatggccgcgttgacagccggcgcg
acgctcgtccgcgaggacgagtacgaacgcgtgctcgtggtgacacccgtcaaacagcaa
cgccgccagttcgtcgccgacctccgccaactcaacgcgggactcgacgagccactcgcc
ggcattgccctcgtcggcaaacgcgatctctgtccgtacggccgcgaggacgtctttccg
cccgacgcgagcgtccatgatcgctgtgaggagctccgtgagaacacagccgacctcgtc
gagagcgacgggtcgagcgacgatcgccccgtcgccgacgccgtgattcggccacggaac
gacgacatctggtgggacccccagacgggcagcgacctggcgaaagcggcccgaccaggt
ggtgtcggccagcaggcggtcgccggcacactcacgaccgccggaaccgagtcaccctac
cgccgcacccagccgactgcccccgacgagatcggcggcgaggacccgccgctgtattgt
cccttcgaggccgactggttcgcccggaacaaggggtcgccgatcggctttgccgccggc
gaagacagcgtggtcactgccgcggagtacctgcccggagccgtcgaacgcgggacctgt
ccccaccgggcgatgcagacgctcgtcggggccgccgccgtcgtgatcggcaactacaac
catctcttcgatcccgcctccagagcgctcatcgaaccgatcctcgacgagcggacgttc
gtgatcgtcgacgaggcccaccgcctggagggccgcgtcagggatctgctgtcggaccgc
ctgggtcgccagacgatcgtccaggcgcgcaacgactgccaccagttgcgctcgatggcc
cgccagagtccggaccacaagcgcgaggtccgggcccacctcggcagccaggacgtgccc
ctggaggccgtcgatcgcgcccgtgacttctacgacgacctgctggactggctcgacgac
cggatcgccgctcacctcgacgacgaagtgggacggagctggcgggccgacgacgcggca
ttgccggagcacgacctggagatcccgctccgcgatcccgacgaacccgaacccgacgaa
ctcacgcggtgggccgaacaggcgggctacgacggcgacctcttccggcaactcgatacg
atcggactggccgtcgaggacgcgagcgaggaactcggcgtcggccgcacgcccgtcgtc
ggcgcggccggcgtgatcatgcgtcggtggtgggaacacgaccacgcgacgacgttccgg
gagatcgaactcgatcactcgccacgggacgatcaacgtatcgaggggtggcgagcgacg
tataccgccgggctgacgctgttcgactgtctcccggccgaggcgctggcgcggaccttc
gaggatgtcggtggcggggtgttgatgagtgcgacgctggaaccgctcgacgtgttcacg
cgggtttcggggctggacacgctggaagaatgggacgacgatcgggacgaacacgacggc
cgccccgtcctcacgcgctcctatggcctctcgttcccgccggcgaatcgcgccagctgg
atcgtcgacgcgacgccctttaccgcccgcaaccgcggcgatccggcgacgatggaaccg
cttggcaccgagtggaacccgacccgcgacgagtacgcccacgtcctccgggccatcgcg
cgcaacccgggcaacgtcctcatcgccatgcccaactaccgcgaggcgacctgggccggc
gcgtacctcgacgacgccgtcgagaagcccgtcctcgtcgacgagtcttccagcagcgag
gcgaccgaggatctcaaacgcgactttttcgccggcgaggggaaggtgctggtcacgagc
acccgagggacgctcacggagggcgtcgactacgacggcgcgaaactccgggcggccgcc
gtcgtcggcgtcccgctggtcaacatcggatcgccccgcgttcgcgcggtccagcgcgcc
tacggcgacgtcttcggcgaggaccatgccttcgagtacgcgctgacgatccccgcggtc
aggcgcgcccgccaggcgatcggtcgggtgatccgcggggctgaggaggtcggcgtccgg
gcgctggtcggcgcacggtacacgcccgaggcgcgtcattcggtctatggctacctctcg
ccggccgagcgcgaggagttcgtgacgatgagctcggagttcctgcccgatcagatcgat
cggttctgggcggagcggtga
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integrated database retrieval system
