Halorhabdus utahensis: Huta_2618
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Entry
Huta_2618 CDS
T00971
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hut
Halorhabdus utahensis
Pathway
hut04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Huta_2618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hut03019
]
Huta_2618
03009 Ribosome biogenesis [BR:
hut03009
]
Huta_2618
04131 Membrane trafficking [BR:
hut04131
]
Huta_2618
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hut04147
]
Huta_2618
Messenger RNA biogenesis [BR:
hut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Huta_2618
Ribosome biogenesis [BR:
hut03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Huta_2618
Membrane trafficking [BR:
hut04131
]
SNARE
SNARE associated proteins
Others
Huta_2618
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Huta_2618
Exosome [BR:
hut04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Huta_2618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
AAA_16
RuvB_N
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
AAA_14
NPHP3_N
nSTAND3
RNA_helicase
AAA_28
Mg_chelatase
IstB_IS21
AAA_7
AAA_18
AAA_17
AAA_3
ATPase
Sigma54_activat
DUF815
ABC_tran
Parvo_NS1
AAA_30
TsaE
AAA_24
NB-ARC
SLFN-g3_helicase
AAA_11
AAA_lid_PRS2_C
PhoH
NACHT
IPT
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
ACV12780
UniProt:
C7NPM5
LinkDB
All DBs
Position
complement(2679262..2681490)
Genome browser
AA seq
742 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVEIRKAEAEKADSLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVVLITEDTDVELREEPISGYD
KTGGGITYEDIGGLENEIQRVREMVELPMKHPQIFKKLGIEPPSGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVVVIAATNRVDSVDPALRRPGRFDREIEIGVPDET
GREEILKIHTRGMPLSDDVDLPGLAEDTHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIIKRDDFKGALNEVSPSAMREVLVELPKISWDDVGGLESAKNDVQESIEW
PMTTPEKFERMGVAPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVAPTVVFFDELDSLAPGRGGQGSGSNVSERVVNQLLTEMDGLEDMED
VMVIGATNRPDMIDPALIRSGRFDRLVYIGEPDVDGREEILDIHTDDSPLSPDVSLRELA
EITEGYVGSDLESIAREAAIQALRESEDAEEIGMAHFRSALEGVRPTVTDDIREYFEQME
DQFKGGGPDSRQPRGSDRIGFQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtccaacttgaggtcgcgaaagcctacccgaacgactcggggcggggtatc
gcgcgcctcgatcccgacacgctgctgcacctgaagctctcccccggcgacatcatcgag
atcgaaggggccgaaaccaccgccgcgaaggtctggcgcgcggaccggcaggactggaac
accgacacggtccgcatcgacggcttcacccggcaaaatgccgacgtgggcatcggcgag
cgcgtcgagatccgcaaggccgaagccgagaaggccgactcgctcgtgctcgcgccgccc
gaggaggcgagcgtccagttcggctcggacgcggccggcatggtcaaacgtcagatcctc
aaacgcccggtcgtcgagcgcgacatcgtccccgtgatgtcctcgacgaaccaccccttc
atgcgctcgccgggccaggccatcccgctgatcgccgtcgagaccgaacccgagggcgtc
gtcctcatcaccgaggacaccgacgtcgagttgcgcgaggaaccgatctcgggatacgac
aagaccgggggcgggatcacatacgaggacatcggcggcctggagaacgagatccagcgc
gtccgcgagatggtcgaactgccgatgaaacacccccagatcttcaagaaactggggatc
gaaccgcccagcggcgtcctcctccacggcccgcccggcacgggcaagacgttgctggcc
aaggccgtcgccaacgagacctcggcgagtttcttctcgatcgccggcccggagatcatc
tcgaagtactacggggagagcgaacagcagttgcgggagatattcgaggacgccaccgag
gagtccccgtcgatcatcttcatcgacgaactcgactcgatcgcgcccaaacgcgaggac
gtcaccggcgaggtcgagcgccgcgtcgtcgcccaactcctgacgatgatggacggcctg
gaatcccgggggcaggtcgtcgtcatcgccgcgaccaaccgcgtcgactcggtcgacccc
gcgctccggcggcccggtcgcttcgaccgcgagatcgagatcggcgtgcccgacgagacc
ggtcgcgaggagatcctcaagatccacacccgcgggatgcccctctcggacgacgtcgac
ctccccggcctggccgaggacacccacgggttcgtcggcgcggacatcgagtccctgacg
aaggaggccgcgatgaaggccctccggcggtacctcccggagatcgacctcgacgaggag
gacatcccgccgagtctcatcgaccggatgatcatcaagcgcgacgacttcaagggcgca
ctcaacgaggtgtcgccctcggcgatgcgggaggtgctcgtcgagttacccaagatcagc
tgggacgacgtcggcgggctcgagtcggcgaaaaacgacgtccaggagtccatcgagtgg
ccgatgaccaccccggagaagttcgagcggatgggcgtcgcacccccgtcgggcgtcctg
ctctatgggccaccggggaccggcaagacgctgatggccaaggccgtcgccaacgagacc
gacgccaacttcatctcggtgcgcgggccacagctgttgagcaagtgggtcggcgagagc
gagaaggccatccgccagaccttccggaaggcccgccaggtcgccccgacggtcgtgttc
ttcgacgaactcgactcgctggcccccggccgtggcggccagggctcggggtcgaacgtc
tccgagcgcgtcgtcaaccagctcctcaccgagatggacggcctcgaagacatggaggac
gtgatggtcatcggcgcgaccaaccgcccggacatgatcgaccccgctctcatccggtcg
ggccgcttcgatcgcctcgtctacatcggcgaacccgacgtcgacggtcgcgaggagatc
ctcgatatccacaccgacgactcgccgctctcgcccgacgtctcgctgcgcgaactcgcc
gagatcaccgagggctacgtcggcagcgacctggagagtatcgcccgcgaggcggccatc
caggccctccgggagagcgaagacgccgaggagatcggcatggcccacttccgatcggcc
ctggagggggtccggccgactgtcaccgacgacatccgcgagtacttcgagcagatggaa
gaccagttcaagggcggcggccccgactcacgccagccccgcggctccgaccggatcggc
ttccagtag
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