Halorhabdus utahensis: Huta_2879
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Entry
Huta_2879 CDS
T00971
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hut
Halorhabdus utahensis
Brite
KEGG Orthology (KO) [BR:
hut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hut03400
]
Huta_2879
Enzymes [BR:
hut01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Huta_2879
DNA repair and recombination proteins [BR:
hut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Huta_2879
Prokaryotic type
Huta_2879
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACV13040
UniProt:
C7NRT5
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All DBs
Position
2960112..2961524
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AA seq
470 aa
AA seq
DB search
MRIHWHRRDLRLADNRALAGDGIETNDEQVLGVFVFDPAVLEHAGPARVVALLDAVAALR
EAYRERGSDLVLASGDPVAELPTLATTYGAELVTWNREYSPLARDRDAAVRASLDDAGIG
RDAVHDAVLHEPGTIRTNDGDPYQVFTYFWRKWRDRRKSAPIAPPDADSLGDVTDDTPVP
TWADLDVEEPTASIPGVTPAAARERLDSFCAGDIYRYEDRRDYPAEDCTSRLSHHLKYGT
IGIRAVYAATERACERGETADDRASVREFQSQLAWREFYTQVLWFNPSVVTENFKSYENP
IEWRTDPEGLQAWKDGETGYPIVDAGMRQLETAAYMHNRVRMIVASFLTKDLLIDWREGY
DWFRAKLVDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDAAYIREYVPELD
GVPADVIHSWHELDPGAREMHAPDYPAPIVDHADRREQALAMFERARGDE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccactggcatcggcgggacctccggctcgccgacaaccgggcgctcgccggc
gacgggatcgagacgaacgacgagcaagtgctgggtgtgttcgttttcgaccccgccgtg
ctcgaacacgctggtccggcccgcgtcgtcgcgctcctcgacgccgtagcggcccttcgg
gaggcttaccgcgaacgggggagcgatctcgtcctcgcgagtggcgatccggtcgcggaa
ctgccgacactcgcgacaacgtacggggccgagctggtcacctggaaccgcgagtacagc
ccgctcgcccgcgatcgtgatgcggctgtccgggcgtcactggacgacgcaggtatcgga
cgggacgccgttcacgacgccgtcctccacgagccggggacgatccggaccaacgacggc
gacccctatcaggtgttcacgtacttctggcggaagtggcgcgatcggaggaaatcagca
ccgattgccccacccgatgcggattcgctgggggacgtaaccgacgacacgccggttccg
acctgggcggacctcgacgtggaggagccgactgcgtcgataccgggcgtcacgccggcg
gccgcccgcgagcgtctcgattcgttctgtgcgggggacatctatcgctacgaggatcgt
cgggactacccggccgaggactgcacgtcccgtctgtcacaccatctcaagtacggcacg
atcggcattcgcgcggtgtatgcggccaccgagcgcgcctgcgagcgtggggagacagcg
gacgaccgcgcgtccgtcagggagttccagtcccagctcgcctggcgggagttctacaca
caggtcctgtggttcaatccgtcggtggtcaccgagaacttcaagtcctacgagaatccg
atcgagtggcggacggatccggagggcttgcaggcctggaaggacggggagaccgggtat
ccgatcgtcgacgccgggatgcgccagctcgagacggcggcgtacatgcacaaccgcgtc
cggatgatcgtcgcatcgttcctgacgaaggacctgctgatcgactggcgagaggggtac
gactggttccgggcgaaactggtcgatcacgatacggccaacgataacggcgggtggcag
tgggccgcctcgaccggcaccgacgcccaaccgtacttccggatcttcaatccaatgacg
cagggcgagcggtacgatcccgacgctgcatacattcgggagtacgttccggaactcgat
ggtgtgccggctgacgtcattcactcgtggcacgaactcgatcccggggctcgcgagatg
cacgcgcccgactatcctgccccgatcgtcgatcacgccgaccgccgggagcaggccctg
gcgatgttcgagcgtgcccgtggtgatgagtag
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