KEGG   Humibacter ginsenosidimutans: FPZ11_02450
Entry
FPZ11_02450       CDS       T06119                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
huw  Humibacter ginsenosidimutans
Pathway
huw03030  DNA replication
huw03410  Base excision repair
huw03420  Nucleotide excision repair
huw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:huw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FPZ11_02450 (polA)
   03410 Base excision repair
    FPZ11_02450 (polA)
   03420 Nucleotide excision repair
    FPZ11_02450 (polA)
   03440 Homologous recombination
    FPZ11_02450 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:huw03032]
    FPZ11_02450 (polA)
   03400 DNA repair and recombination proteins [BR:huw03400]
    FPZ11_02450 (polA)
Enzymes [BR:huw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FPZ11_02450 (polA)
DNA replication proteins [BR:huw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     FPZ11_02450 (polA)
DNA repair and recombination proteins [BR:huw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     FPZ11_02450 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FPZ11_02450 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: QDZ13803
UniProt: A0A5B8M082
LinkDB
Position
complement(506405..509074)
AA seq 889 aa
MSDPQKPTLLIIDGHSLAFRAFFALVQTGNFITDEGQHTEAVYGFLSMMLRLLKDEEPTH
LGVAFDLSRKSFRTDEYAEYKEGRGETPPEFSGQVGLLQDALTAMNVTWITKEDYEADDI
LATLAAQGAQQGFRVLVVSGDRDSFQLIDDDVTVLYPSAMGVTELKRYDAQAVFDKYKVW
PHQYPELAALVGEKADNLPGIDKVGPVTAAKWIAQWGTVDEILAHADEIKGVAGNNLREQ
RDRAERNRRLNALVRDLDLPYGPVDLARRPIDEVAVREVLGALQMRTMLDRVLKLGQTDA
AATSGAIARSAAPEVRTLAADEVAAWIAAQDAPLGLAVSVEVEGGEFAGVGLSSLTASAH
VPVTALDGLRDWLADVSAPKVFFGAKRQLEDAEHAGLTIRGAVHDTRVMGGILSPTRVPA
TLGDQVLGALEESMPVSDPNQLVPEVPALGPATEAWYVARVADAVNATLATEVNANARRV
YDEIELPLIPVLAGMELDGVAIDRGVLAGQREVLEKGAETYRTAAFAAIGHEVNLGSPKQ
LQTVLFDELKLPPTRKTKTGYSTDADSLADLLESIEEENEGSIFLQSLLRHRDATKLKQM
IETLEKSIGSDGRIHTTYDQVGAATGRMSSNDPNLQNIPVRSEEGRRIRSAFIAGEGFES
LLTADYSQIEMRIMAHLSGDAGLIEAFREGEDLHRYVGSHVFGVAPGDVTPAMRNKVKAM
SYGLAYGLGPFGLAKQLRITQAEARQLMTDYFERFGRVRDYLRDVVQQAKSDGYTETIFG
RRRPFPDLNSPNRVLRDNAERAALNSPIQGSAADIMKIAMLGVAADMAQARLGSRMLLQV
HDELIFEVAPGERKQLEEIVTRRMSTAATLDVPLTVQVGIGPDWDAAAH
NT seq 2670 nt   +upstreamnt  +downstreamnt
gtgtcggacccgcaaaagcctaccctcctgatcatcgacggccattcgctggcattcaga
gcgttcttcgcgctcgtgcagaccggcaatttcatcacggacgagggtcagcacaccgag
gccgtctacggcttcctctcgatgatgctgcgactgctcaaagacgaagaaccgacgcac
ctgggggtggcgttcgatctctcccgcaagtcgttccgcaccgacgagtacgccgagtac
aaagagggcaggggagagaccccgcccgaattcagcgggcaggtcggcctgctgcaggat
gccctcaccgccatgaacgtgacgtggatcacgaaagaggactacgaggccgacgacatc
ctcgccacgctcgcggcccagggcgcgcagcaggggttccgagtgctcgtcgtctccggt
gaccgcgacagcttccagctcatcgacgacgacgtcaccgtgctctacccgagtgccatg
ggcgtcaccgagctcaagcgctacgacgcccaggccgtcttcgacaagtacaaggtgtgg
ccgcaccagtacccggaactcgcggcgctcgtaggagagaaggccgacaacctgcccggc
atcgacaaggtcggacctgtcaccgccgccaagtggatcgcgcagtggggcaccgtcgac
gagatcctggcgcacgccgacgagatcaagggcgtcgcgggcaacaaccttcgcgagcaa
cgtgatcgcgccgagcgcaaccgcagactgaacgcgctcgtgcgcgacctcgatctgccg
tacggtccggtcgacctcgcgcgtcgcccgatcgacgaggtcgcggtccgcgaggtgctc
ggcgcactgcagatgcgcaccatgctcgaccgcgtgctgaagctcgggcagacggatgcc
gcggccacctccggtgcgatcgcccggtccgccgcgcccgaagtgcggacgctcgccgcc
gacgaggtcgcggcctggatcgccgcgcaggatgccccgctcggcctcgccgtctccgtc
gaggtcgagggtggcgagttcgccggggtgggactgtcgagcctgaccgcgagtgcccac
gtccccgtgaccgccctcgacggactgcgggactggctcgccgacgtctcagcaccgaag
gtgttcttcggcgccaagcggcaactcgaagacgccgagcacgcgggcctcacgattcgg
ggtgccgtgcacgacacacgggtgatgggcggcatcctcagccccacccgcgtgcccgcg
acgctcggcgatcaggtgctcggggcgctggaggagagcatgccggtctccgaccccaac
cagctcgttcccgaggtgccggctctcggccctgcaacggaggcctggtacgtggcgcgc
gtggccgacgccgtgaacgccacgctcgccaccgaggtgaacgcgaacgccaggcgggtg
tacgacgagatcgagctgccgctcatccccgtgctcgccggcatggaactcgacggggtg
gccatcgaccgcggcgtgctcgccggtcagcgcgaggtgctcgaaaagggtgcggagacg
tatcgcacggcggcgttcgctgcgatcgggcacgaggtcaacctggggagcccgaagcag
ctgcagaccgtgctcttcgacgagctgaagctgccgcccacacgcaagaccaagaccggg
tactcgaccgacgccgactcgctcgccgatctgctggaaagcatcgaggaggagaacgag
ggatcgatcttcctgcagtcgctgctgcgtcaccgcgacgccaccaagctcaagcagatg
atcgagacgctggagaagtcgatcggttccgacgggcgcatccacacgacatacgaccag
gtgggcgcggcgaccggccgcatgtcgtcgaacgaccccaacctgcagaacatccctgtt
cgctcggaggagggcaggcgcatccgctccgccttcatcgcaggggagggcttcgagtcg
ctgctcaccgccgactactcgcagatcgagatgcgcatcatggcccacctctcgggagac
gccggcctcatcgaggcgttccgggagggcgaggatctgcaccgctacgtcggcagccac
gtgttcggcgtggcccccggcgacgtcacgcccgccatgcgcaacaaggtcaaggccatg
tcgtacgggctcgcctacggccttgggcctttcggcctcgccaagcagttgcgcatcacg
caggcggaggcgcgccagctgatgaccgactacttcgagcggttcggccgtgtgcgcgac
tacctgcgcgatgtggtgcagcaggccaagagcgacggctacaccgagacgatcttcggg
cgccgcaggccgttccccgacctgaacagcccgaaccgcgtgctgcgcgacaacgcggag
cgtgccgctttgaactcgcccatccagggctcggcggcagacatcatgaagatcgccatg
ctcggcgtcgccgccgacatggcgcaggctcggctgggctcccggatgctcctccaggtg
cacgacgagctcatcttcgaggtggcgccgggggagagaaagcagctcgaggagatcgtc
acccgccgcatgtcgacggcggcgacgctcgacgtcccgctcaccgtgcaggtgggtatc
ggccccgactgggatgccgccgcgcactga

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