Humibacter ginsenosidimutans: FPZ11_02450
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Entry
FPZ11_02450 CDS
T06119
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
huw
Humibacter ginsenosidimutans
Pathway
huw03030
DNA replication
huw03410
Base excision repair
huw03420
Nucleotide excision repair
huw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FPZ11_02450 (polA)
03410 Base excision repair
FPZ11_02450 (polA)
03420 Nucleotide excision repair
FPZ11_02450 (polA)
03440 Homologous recombination
FPZ11_02450 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
huw03032
]
FPZ11_02450 (polA)
03400 DNA repair and recombination proteins [BR:
huw03400
]
FPZ11_02450 (polA)
Enzymes [BR:
huw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FPZ11_02450 (polA)
DNA replication proteins [BR:
huw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FPZ11_02450 (polA)
DNA repair and recombination proteins [BR:
huw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FPZ11_02450 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FPZ11_02450 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QDZ13803
UniProt:
A0A5B8M082
LinkDB
All DBs
Position
complement(506405..509074)
Genome browser
AA seq
889 aa
AA seq
DB search
MSDPQKPTLLIIDGHSLAFRAFFALVQTGNFITDEGQHTEAVYGFLSMMLRLLKDEEPTH
LGVAFDLSRKSFRTDEYAEYKEGRGETPPEFSGQVGLLQDALTAMNVTWITKEDYEADDI
LATLAAQGAQQGFRVLVVSGDRDSFQLIDDDVTVLYPSAMGVTELKRYDAQAVFDKYKVW
PHQYPELAALVGEKADNLPGIDKVGPVTAAKWIAQWGTVDEILAHADEIKGVAGNNLREQ
RDRAERNRRLNALVRDLDLPYGPVDLARRPIDEVAVREVLGALQMRTMLDRVLKLGQTDA
AATSGAIARSAAPEVRTLAADEVAAWIAAQDAPLGLAVSVEVEGGEFAGVGLSSLTASAH
VPVTALDGLRDWLADVSAPKVFFGAKRQLEDAEHAGLTIRGAVHDTRVMGGILSPTRVPA
TLGDQVLGALEESMPVSDPNQLVPEVPALGPATEAWYVARVADAVNATLATEVNANARRV
YDEIELPLIPVLAGMELDGVAIDRGVLAGQREVLEKGAETYRTAAFAAIGHEVNLGSPKQ
LQTVLFDELKLPPTRKTKTGYSTDADSLADLLESIEEENEGSIFLQSLLRHRDATKLKQM
IETLEKSIGSDGRIHTTYDQVGAATGRMSSNDPNLQNIPVRSEEGRRIRSAFIAGEGFES
LLTADYSQIEMRIMAHLSGDAGLIEAFREGEDLHRYVGSHVFGVAPGDVTPAMRNKVKAM
SYGLAYGLGPFGLAKQLRITQAEARQLMTDYFERFGRVRDYLRDVVQQAKSDGYTETIFG
RRRPFPDLNSPNRVLRDNAERAALNSPIQGSAADIMKIAMLGVAADMAQARLGSRMLLQV
HDELIFEVAPGERKQLEEIVTRRMSTAATLDVPLTVQVGIGPDWDAAAH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggacccgcaaaagcctaccctcctgatcatcgacggccattcgctggcattcaga
gcgttcttcgcgctcgtgcagaccggcaatttcatcacggacgagggtcagcacaccgag
gccgtctacggcttcctctcgatgatgctgcgactgctcaaagacgaagaaccgacgcac
ctgggggtggcgttcgatctctcccgcaagtcgttccgcaccgacgagtacgccgagtac
aaagagggcaggggagagaccccgcccgaattcagcgggcaggtcggcctgctgcaggat
gccctcaccgccatgaacgtgacgtggatcacgaaagaggactacgaggccgacgacatc
ctcgccacgctcgcggcccagggcgcgcagcaggggttccgagtgctcgtcgtctccggt
gaccgcgacagcttccagctcatcgacgacgacgtcaccgtgctctacccgagtgccatg
ggcgtcaccgagctcaagcgctacgacgcccaggccgtcttcgacaagtacaaggtgtgg
ccgcaccagtacccggaactcgcggcgctcgtaggagagaaggccgacaacctgcccggc
atcgacaaggtcggacctgtcaccgccgccaagtggatcgcgcagtggggcaccgtcgac
gagatcctggcgcacgccgacgagatcaagggcgtcgcgggcaacaaccttcgcgagcaa
cgtgatcgcgccgagcgcaaccgcagactgaacgcgctcgtgcgcgacctcgatctgccg
tacggtccggtcgacctcgcgcgtcgcccgatcgacgaggtcgcggtccgcgaggtgctc
ggcgcactgcagatgcgcaccatgctcgaccgcgtgctgaagctcgggcagacggatgcc
gcggccacctccggtgcgatcgcccggtccgccgcgcccgaagtgcggacgctcgccgcc
gacgaggtcgcggcctggatcgccgcgcaggatgccccgctcggcctcgccgtctccgtc
gaggtcgagggtggcgagttcgccggggtgggactgtcgagcctgaccgcgagtgcccac
gtccccgtgaccgccctcgacggactgcgggactggctcgccgacgtctcagcaccgaag
gtgttcttcggcgccaagcggcaactcgaagacgccgagcacgcgggcctcacgattcgg
ggtgccgtgcacgacacacgggtgatgggcggcatcctcagccccacccgcgtgcccgcg
acgctcggcgatcaggtgctcggggcgctggaggagagcatgccggtctccgaccccaac
cagctcgttcccgaggtgccggctctcggccctgcaacggaggcctggtacgtggcgcgc
gtggccgacgccgtgaacgccacgctcgccaccgaggtgaacgcgaacgccaggcgggtg
tacgacgagatcgagctgccgctcatccccgtgctcgccggcatggaactcgacggggtg
gccatcgaccgcggcgtgctcgccggtcagcgcgaggtgctcgaaaagggtgcggagacg
tatcgcacggcggcgttcgctgcgatcgggcacgaggtcaacctggggagcccgaagcag
ctgcagaccgtgctcttcgacgagctgaagctgccgcccacacgcaagaccaagaccggg
tactcgaccgacgccgactcgctcgccgatctgctggaaagcatcgaggaggagaacgag
ggatcgatcttcctgcagtcgctgctgcgtcaccgcgacgccaccaagctcaagcagatg
atcgagacgctggagaagtcgatcggttccgacgggcgcatccacacgacatacgaccag
gtgggcgcggcgaccggccgcatgtcgtcgaacgaccccaacctgcagaacatccctgtt
cgctcggaggagggcaggcgcatccgctccgccttcatcgcaggggagggcttcgagtcg
ctgctcaccgccgactactcgcagatcgagatgcgcatcatggcccacctctcgggagac
gccggcctcatcgaggcgttccgggagggcgaggatctgcaccgctacgtcggcagccac
gtgttcggcgtggcccccggcgacgtcacgcccgccatgcgcaacaaggtcaaggccatg
tcgtacgggctcgcctacggccttgggcctttcggcctcgccaagcagttgcgcatcacg
caggcggaggcgcgccagctgatgaccgactacttcgagcggttcggccgtgtgcgcgac
tacctgcgcgatgtggtgcagcaggccaagagcgacggctacaccgagacgatcttcggg
cgccgcaggccgttccccgacctgaacagcccgaaccgcgtgctgcgcgacaacgcggag
cgtgccgctttgaactcgcccatccagggctcggcggcagacatcatgaagatcgccatg
ctcggcgtcgccgccgacatggcgcaggctcggctgggctcccggatgctcctccaggtg
cacgacgagctcatcttcgaggtggcgccgggggagagaaagcagctcgaggagatcgtc
acccgccgcatgtcgacggcggcgacgctcgacgtcccgctcaccgtgcaggtgggtatc
ggccccgactgggatgccgccgcgcactga
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