Humibacter ginsenosidimutans: FPZ11_02960
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Entry
FPZ11_02960 CDS
T06119
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
huw
Humibacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
huw03032
]
FPZ11_02960
03400 DNA repair and recombination proteins [BR:
huw03400
]
FPZ11_02960
Enzymes [BR:
huw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FPZ11_02960
DNA replication proteins [BR:
huw03032
]
Prokaryotic type
DNA Topoisomerases
FPZ11_02960
DNA repair and recombination proteins [BR:
huw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FPZ11_02960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
QDZ13877
UniProt:
A0A5B8LZS4
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Position
610658..613147
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AA seq
829 aa
AA seq
DB search
MSAADNRRSSRSASTDSSTPERIEDIDVAREMQSSYLEYAYSVIYSRALPDARDGLKPVQ
RRILYQMSEMGLRPDRAHVKSARVTGEVMGKLHPHGDSAIYDALVRMAQDFTLRLPLING
HGNFGSLDDGPAAARYTEVRLAPAALTMTEGIDEDEVDFVPNYDNQLMQPDVLPSAIPNL
LVNGASGIAVGMATNMAPHNLVEVVGAARHLLDNPDAGLDELMEFVPGPDLPGGGIIAGL
DGVKDAYATGRGTFRTRAKVSVEPITARKTGLVVTELPYLVGPEKVIEKIKDGVNAKKLA
GISDVTDLSDRSRGLHLVIGIKTGFSPQAVLEQLYRYTPLEDGFAINNVALVDGSPRTLG
LRELLRVYLDHRIEVVTRRSRFRLARKRERLHLVEGLLIAILDIDEVIQVIRTSDDSDQA
RSRLMQVFDLSQVQSEYILELRLRRLTKFSRIELETERDTLQAEIAELEQILASDDRIRE
VVSNELGDVAERFGTPRRTLLTSAKPSKATSAKAQAILEVADVPCRVFLTATGRLVRVDL
EPDAEGATPRITPPTRRSKHDAIRGAVSTSTRTEIGAVTDRGRIVRFTPVDLPAVPTNSV
QPAAGVRASDYIGLTDKNEHVIAVVTSDSDSPLTLGTAQGVVKRLSPGDWANKPEFEVIA
LKPGDRVVGACETSDADELVFVTTDAQLLRFAASSVRPQGRGAGGMAGIKLSSGASAVYF
GAVTPTAADDTVVVTVATNGSTLAGTNPGTGKVSSFAEFPAKGRATGGVRAQRFLKGEDQ
VSLAWVGEAPALAVSSDGVARALPEVGAKRDASGTPLDAVIGAIGSAVR
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagcagacaaccgcagatcaagccgttccgcgtcgaccgactcgtcgacgccc
gagcgcatcgaggacatcgacgtcgcgcgggagatgcagagctcgtacctcgagtacgcg
tattcggtcatctattcgcgcgcactgcccgacgcgcgggacggtctcaagcccgtgcag
cggcgcatcctctatcagatgagcgagatggggctgcgtcccgatcgggcgcacgtgaag
tcggcgcgcgtcacgggcgaggtgatgggcaagctgcatccgcacggcgactcggccatc
tacgacgccttggtgcgcatggcccaggacttcacgttgcggctgccgctgatcaacggg
cacggcaacttcggttcgctcgacgacggacccgccgcagccaggtacaccgaggtgcgc
ctcgcgcccgcggctctgacgatgaccgagggaatcgacgaagacgaggtcgacttcgtt
cccaactacgacaaccagctgatgcagcccgacgtgctgcccagcgccatcccgaacctg
ctggtcaacggtgccagcggcatcgcggtgggcatggccacgaacatggcgccgcacaat
ctcgtcgaggtggtcggcgccgccaggcatcttctcgacaatcccgatgccggcctcgac
gagctgatggaattcgttcccggtccggatctgcctggcggcggcatcatcgccggactc
gacggcgtgaaggatgcctacgccaccggccgaggaacgttccgcaccagggccaaggtc
tccgtcgagccgatcaccgcccgcaagacgggactcgtggtcaccgagctgccctacctg
gtgggccccgagaaggtgatcgagaagatcaaggacggtgtcaacgcgaagaagctcgcc
ggcatctccgacgtcaccgacctcagcgaccgcagccgcggcctccacctggtgatcggc
atcaagaccggattcagcccgcaggcggtgctggagcagctgtatcgctacaccccgctc
gaagacggcttcgccatcaacaacgtggcgctcgtcgacggcagcccgcgcaccctcggc
ctgcgcgagctgttgcgcgtctacctcgatcaccggatcgaggtcgtcaccaggcggtcg
cggttccggctcgcgcgcaagcgtgagcgactgcacctggtcgaggggttgctcatcgcc
atcctcgacatcgacgaggtcatccaggtcattcgcaccagcgacgacagcgatcaggcc
cgcagccgtctgatgcaggtcttcgacctcagccaggtgcagtccgagtacatcctcgag
ctgcgccttcgtcgcctcaccaagttctcccgcatcgaattggagaccgagcgcgacacg
ctgcaggcggagatcgcggaactcgagcagatcctggccagcgacgaccgcatccgcgag
gtcgtgtcgaacgagctcggcgatgtggccgagcgattcggcactccgcgacgcacgctt
ctcacctcggcgaagccgtcgaaggcgacgagcgcgaaggcacaggcgattctcgaagtc
gccgacgtgccgtgccgggtcttcttgacggcgacggggcgccttgtgcgtgtcgatctc
gagccggatgccgagggcgcgacgccgcgcatcactcccccgactcgccggagcaagcac
gatgcgatccggggagcagtgtcgacctcgacgcgcacggagatcggtgccgtcaccgac
cgcggacggatcgtgcgcttcacccccgtcgacctccccgcggtgccgacgaactcggtg
cagccggcggcgggggttcgggcgtcggactacatcggtctcaccgacaagaacgagcac
gtgatcgctgtcgtcacgtctgactctgactcgcccttgacgctcggcaccgcacagggc
gtcgtgaagcgcctcagccccggtgactgggcgaacaagcccgagttcgaggtgatcgct
ctgaagcccggcgaccgcgtggtcggcgcctgcgagacatccgatgccgacgaactcgtg
ttcgtcacgacggacgcccagctgctgcgattcgccgcatcgtccgtacgtccccagggc
cgaggcgcgggaggcatggccggcatcaagctgtcgtccggagcgagcgccgtgtacttc
ggggccgtgactccgaccgctgccgatgacaccgtcgtggtgaccgtcgcgacgaacggg
agcactctcgcaggcacgaacccgggcacggggaaggtctcgagcttcgccgagttcccc
gccaagggacgggccacgggcggtgtgcgagcacagcgcttcctgaagggcgaggaccag
gtctcactcgcctgggtgggcgaggcgcccgcactcgccgtttcgtccgacggcgtcgcg
cgtgccctgccggaggtgggcgcgaagcgcgacgcatcgggtacgccgctcgacgccgtc
atcggcgcgatcggttcggcagtccgctga
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