Humibacter ginsenosidimutans: FPZ11_04325
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Entry
FPZ11_04325 CDS
T06119
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
huw
Humibacter ginsenosidimutans
Pathway
huw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FPZ11_04325 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
huw03400
]
FPZ11_04325 (mutM)
Enzymes [BR:
huw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FPZ11_04325 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FPZ11_04325 (mutM)
DNA repair and recombination proteins [BR:
huw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FPZ11_04325 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Zn_ribbon_TFIIB
DZR_2
NFACT_N
DZR
DNA_ligase_ZBD
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
QDZ14106
UniProt:
A0A5B8M1F4
LinkDB
All DBs
Position
complement(890670..891641)
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AA seq
323 aa
AA seq
DB search
MPELPEVEVVRAGLEPAVSGALITSVEVLDERGITRHDRARGDLDELLTGSRMLGAARRG
KFLWVPLEPRHPAAALTGTGGVVLEREPVVAPADALLLHLGMSGQVLLREAGTPPEGHAR
VRMTLEHPVHGELAVHFVDQRTFGSLAVDRLTPTPDGRAGGFGSELSSVPSQVAHIARDP
LDPAFDDDGFLVALQRRRTTVKRALLDQTLVSGIGNIYADEALWASRIHFDQPTTTLSRR
KANELLAEVRAVLQKALAEGGTSFDAQYVNVNGASGYFAHSLNAYGRTGEACPRCGTPIV
RASFMNRSSHYCPRCQRVRGGRA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgccagagcttcccgaggttgaggtggtgcgcgccgggctcgagccggccgtcagcggc
gcactgatcacctcggtcgaggtgctcgacgagcgcggaatcacgcgtcacgaccgtgca
cggggcgacctggacgaactgctcacggggtcgcggatgctcggcgccgcccgccgcgga
aagttcctgtgggtgccgctcgagccacggcatcccgccgccgcgctcaccgggacaggt
ggcgtcgtgctcgaacgcgagcccgtcgtcgcacccgccgatgcgctgctgctccacctc
ggcatgagcggccaggtgctgctgcgagaggcggggacacccccggaggggcacgcacgg
gtgcggatgacgctcgaacatccggtgcacggcgagttggccgtgcacttcgtcgatcag
cgcacgttcggttcgctcgctgtcgaccgcctgacgcccacgcccgacggccgtgcaggc
ggcttcggctccgagctgtcgagcgtgccatcgcaggtggcgcacatcgcgcgcgatccg
ctcgatccggcgttcgatgacgacggctttctggtcgcactgcagaggcgtcgcaccacg
gtgaaacgagcgctgctcgatcagaccctggtcagcggcatcggcaacatctacgcggac
gaggcgttgtgggcatcccgcatccatttcgatcaaccgacgacgacgctgtcgcgacgc
aaggcgaacgagctgctcgccgaggtgcgcgctgttcttcagaaggcactcgcggagggc
ggcacgagcttcgacgcccaatatgtcaatgtcaacggagcgtcgggctacttcgcgcac
agcctcaacgcctacgggcgtacgggtgaggcgtgtccgcgctgcggcacccctatcgtg
cgggcgtcgttcatgaaccggtcatcgcactactgccctcgctgtcagcgcgtgcgaggc
gggcgcgcctga
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