Humibacter ginsenosidimutans: FPZ11_04440
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Entry
FPZ11_04440 CDS
T06119
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
huw
Humibacter ginsenosidimutans
Pathway
huw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FPZ11_04440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
Cep192_D6
DUF2807
Hira
Motif
Other DBs
NCBI-ProteinID:
QDZ14126
UniProt:
A0A5B8M1H4
LinkDB
All DBs
Position
complement(916860..922712)
Genome browser
AA seq
1950 aa
AA seq
DB search
MDTSLGQLDTVRNAESPSGVVQSGDSGIVYTDGFQKAWSIDAADPHDLQTSGGSTSSAGD
TAAAASTGSTSGSGDDAKSSPAGTAQVLNSGSWVLYLTADGHVFVQNLRSGSAASSPFQV
QAPAGTTKSGYTVTAATITSNGVVLLYSAKERAVRRYDAASGAFVGGAQAVRQAPASDAK
VLLTAAGTSWVLAEPSAHRVWMPSHDGPLRAAFSTGAVAGDGVATGSVAYFADSRGLITV
DTESGTVKRAATASGTPAPPTVVGGEVYAAWLGPGGGTLWGSTSSRTRALTVPSGVVERA
SSLAPMIASNGSTAVLDETSTGLLWTIPSGTLIPRSQWSAQSTPREQQTSEQVVQVPQEE
PPVAVPSTFGVRAGAQTLLPVLLNAYDPNKDDVLTIDPGSITALSDPGFGTLSLANDDQG
VVFTAHAQSGSATFSYAVTDGREKSAPATVTVNLMPSTQRSAPVWCGVQECRQSWPVASL
APGGSTRVQVLTGWVDPDGDPMVLESAAKVEAKAPITVVPAPDGTVVIQHTDPNAAGASY
HVMVTVADARGGVSQKTLDVEVAANPALQVHSFTALAGVGQTRTVDVGPHISGGSGSYRL
LSAVATSGQGQVTVDADPSTDSLTLSAGSAGDHTIRVTVQDLQTHAQQTGTMRFSVEAHA
QALTIPPQTAFVQSKQDTTLDVLDVVQTMSSRVLSVVSATSNTPSLSVSVVGTRRLRVSG
STGDGQPGEVGVADFTVTDGAGTTAQGQVTVFLSPRSSGVAPIPVPDAVTVRAGAQIDIP
VTANDIAPRGEQIELSPSVRGSGAPGELAFASGTTLRYLAPTKAGTYTLHYSVFLASDPE
RVASSIVTVTVIGSGGDHPPTPPALSASVVSGSTVSIPVPTSGADPDGDTTSLSGVDLLR
SGQGTASMNAEGTAIEYTAPAAGVTGGQLQFRYRLRDTQGEDAAGTVTVAVLPAAHADVT
PVTYTDTVHAVVGSPKTITAQPLLSDSDPAGGTLRLVSLVPNAPQKSSDGEYARLKALID
PATDLSKGIVKLRAGAVQGVQSYIYTVRSSATTSTAQGLIVVDVTEQAAPETPVVADTVV
TLADRLRLATGIDVVSGKVVWPSGDAATMTLNVVGAAASRYTAKGNRISGPLPADGALIP
FSLTGTDVFGHKRVAYGFLRIPAFDEMPVALKSGLDPYNVGEEQTTTVDVAKAAGVAKGD
RLELKSGSELPVQRANARCEVRDGTRIGYSAGRDAPWSDTCTVQVRVAGQKNWTALAIPF
TVRPKAPQAILTSLSRTVPPGQTQTIDLYSDMTGWDGGRVGDQSSLDYTVSSPGSDFIVT
QKGRTLTVEARADAHSGAVDTVAVSVSSFGGLSAQISLVVGIAAPDTPRGATFSQTCRVN
SGPSCTITVIGQSGQYDPFAGKPGGGLKLAGIGDVNCSVASLSLSGTNAITATWPRSAKP
AGGTCQVPYTVVDAQGRQGQGTLALDVQGYPAVPNSITTAAYTAGSVTFLVDLGSAAAAH
PSLTGVDIEEDGKPVAAQCAPSVPGAYSCTVSGLTNGQPHSFTARAVNAIGESGDTTPVV
AWSYESPVVSSVTATPDTPVTANTGTASISIRSRQSSGVASFLLRDSSGAQTTVQLQGGD
TTNYEWQGLPVGTQTITVIPVSRYQPPNGAWGGAATGDAMSATVTIAGAPGFSSDGSLRA
LSNTSVELDGVQPNANYSAKTLSVIYAVWASGDSTPTCSMDQDGSPTIRGATSQTSTVFT
GLDQFTSYRGMACVSNGYQATASNPVSVFTWTSTPGVSGSYTYTVGTTPKTSSTGTSTTL
SWNDISGPSPSVPGPPNSRFSTQYTAAATGQTSQSFGDLFSSDRTPGTITVAYCWNGISC
GSAATIAPTGAPTTAWVSVQTTPTTTPMVSDLQFSGSVDAPSGDGLTGSSGDVAVTITVD
TTTNVVTYSLAFTGAYSAFGTVTLTRPYGS
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
gtggacacatcgctcgggcagctcgacacggtgcgcaacgccgagtcgccgagcggggtg
gtgcagagcggcgactcgggcatcgtctacacggacggctttcagaaggcctggtcgatc
gacgcggccgatcctcacgatctgcagacgtcgggtggcagcacctcgtcggcaggtgac
acggcggcagcggcgtcgaccggatcgacgagcgggtcgggcgacgacgcgaagtcgtct
ccagcaggcaccgcgcaggtgttgaactccggcagctgggtgctctacctgacggcggac
gggcacgtcttcgtacagaacctgcgctcgggctcggccgcgtcgtcgccgttccaggtg
caggcgcccgccggaacgaccaagagcggctatacggtgaccgccgcgacgatcacctcg
aacggagtcgtgctgctgtactcggcgaaggagcgcgccgtgcgccgctatgacgcggca
tccggcgccttcgtcggaggagcgcaggccgttcgacaggctccggcctccgacgccaag
gtgctgctcacggcggcgggcacctcgtgggtgctcgccgagccgtccgctcaccgcgtc
tggatgccgtcgcacgacggtccgctgcgtgcggccttctccacgggcgccgtcgcgggg
gacggtgtcgcgacgggttccgtcgcgtacttcgccgacagtcgtggactgatcaccgtc
gacaccgagtccggcacggtgaagcgcgccgcgacggcatcaggcacgcctgcaccgccc
acggtcgtcggcggagaggtctacgccgcctggctcggcccgggcggcggaaccctgtgg
ggatcgaccagttcgcgcacgagagcattgacagtgccgtccggtgtcgtcgagcgggcg
agctcgctcgcgccgatgatcgcctccaacggcagcacggcggtgctcgacgagacgtcg
acgggtctgttgtggacgatcccctccggcacgctcatccctcgttcgcagtggtctgcg
cagagcacgcctcgtgagcagcagacgagcgaacaggtcgtgcaggttccccaagaggag
ccgccggtggccgtgccgtcgactttcggcgtgcgcgccggcgcgcagacgctcctgccc
gtgctgctgaacgcgtacgacccgaacaaggacgacgtgctcacgatcgatcccggttcg
atcacggcactcagcgacccggggttcggaacactgtctctggcgaacgacgaccagggc
gtggtcttcacggcgcacgcccagagcggcagcgcgaccttctcgtacgcggtcaccgac
gggcgggagaagtccgccccggcgaccgtcaccgtcaacctgatgccgtcgactcagcgc
agcgcgcctgtctggtgcggcgtgcaggagtgtcggcagagctggcccgtcgcttcgctc
gcaccgggcggaagcacgcgtgtgcaggtgctcaccggttgggtcgatccggacggcgac
ccgatggttctcgagtcggcggccaaggtcgaggccaaggcgccgatcacggtggtgccc
gcgcccgacggcaccgtcgtcatccagcacaccgacccgaacgccgcgggggcgagctat
cacgtcatggtcacggtggcggatgcccgtggcggcgtcagccagaagaccctcgacgtc
gaggtcgccgcgaatcccgcgctgcaggtgcactccttcacggcgctggccggcgtcggt
cagacccgcaccgtcgatgtcggcccgcacatcagcgggggatcgggatcctatcggctg
ctgagcgcggtcgccacgagcgggcaagggcaggtgaccgtcgacgccgacccgtcgacg
gactcgctgacgttgtccgccgggtcggcaggagaccacacgatcagggtcacggtgcag
gacctgcagacgcacgcccagcagaccggcacgatgcggttctcggtcgaggcccatgcc
caggcgctgaccatcccgccgcagaccgcattcgtgcagagcaaacaagacaccactctc
gacgtgctcgatgtggtgcagaccatgtcgtcgcgggtgctgtcggtggtctccgccacc
tcgaacacgcccagcctgtcggtctccgtcgtcggaacgcgtcggttgagggtgtcgggc
tcgacgggggacggccagccgggcgaggtcggcgtcgccgacttcaccgtgaccgatggc
gcaggcacgacggcccagggacaggtgaccgtcttcctctccccgcgttcgtcgggcgtc
gcaccgattcctgttccggatgccgtcaccgtgcgagcgggagcccagatcgacattccc
gtgacggcgaacgacatcgcgccgcggggcgagcagatcgagctctcgcccagcgtgcgg
gggtcgggagcacccggcgagctcgccttcgcctccggaacgacgctgcgctatctcgcg
ccgacgaaggcgggcacctacacactgcactattcggtgttcctcgcctccgacccggag
cgcgtggcctcctcgatcgtcacggtgaccgtcatcggctcaggaggggaccacccgccg
acgccgccggcactcagcgccagcgtggtctctggcagcaccgtgagcatcccggttccc
acctcaggggccgaccccgacggcgacacgacgagtctctccggcgtcgacctgctgcgc
tccgggcaggggacggcgtcgatgaacgccgagggcacggcgatcgaatacacggcgccg
gccgcgggcgtcacgggcggtcagctgcagttccgctaccggctgcgcgacacccagggc
gaagacgccgcaggcaccgtcacggtggcggtgctgcctgcagcacacgccgatgtcact
cccgtgacgtacaccgacaccgtgcacgccgtcgtgggctcgcccaagacgatcaccgcg
cagccgctgctcagcgacagtgacccggcgggcggcaccctgcgactcgtctcgctcgtg
ccgaacgcgccgcagaagtcgtcggacggcgagtacgcgcggctgaaggcactcatcgac
cctgcgaccgatctgagcaagggcatcgtcaagttgcgtgccggtgccgtgcagggtgtg
cagtcgtacatctacaccgtgcgctcgagcgcgaccacctcgacagcccagggcctcatc
gtggtcgacgtcaccgagcaggcggcgcccgagacccccgtcgtggccgataccgtcgtg
acgctcgccgaccggcttcggctcgccaccggcatcgacgtcgtcagcggcaaggtggtc
tggccgtcgggtgatgccgcgacgatgacgctgaacgtggtcggcgctgcggcatccagg
tacacggcgaagggcaaccggatctcagggccgctgcccgcggacggtgccctgattccg
ttctcgctgaccggaaccgacgtgttcggccacaagcgcgtcgcgtacggctttctgcgc
atcccggcgttcgacgaaatgccggtggcgttgaagagcggtctcgatccttacaacgtc
ggcgaggagcagaccaccaccgtcgatgttgcgaaggcggccggtgtcgccaagggcgac
cgactcgagctgaagagcggcagcgagctgcccgtgcaacgcgcgaacgcgcgctgcgag
gtgcgcgacggcacccgcatcggctacagcgcgggcagggatgctccgtggagcgacacc
tgcacggtgcaggtgcgcgtcgcaggccagaagaactggacggcgctcgccatcccgttc
acggtgcgcccgaaggcgccgcaggcgatcctgacttcgctcagccgcacggtgccgccc
ggccagacccagaccatcgacctctactccgacatgacgggctgggacggcggacgcgtc
ggcgatcaatcgtcgctcgactacacggtgtcctcgcctggcagcgacttcatcgtgacg
cagaaggggcgcacgctcacggtcgaggccagagcggacgcgcactccggcgccgtcgac
acggtggcggtctccgtgtcgtcgttcggcgggctgagcgcgcagatctcgctggtcgtc
ggcatcgccgcgcccgacacgccgaggggcgcgacgttcagccagacgtgccgcgtgaac
tccggtcccagctgcacgatcaccgtcatcggacagtcgggccagtacgacccgttcgcg
ggcaaacccggaggcggtctcaagctggcgggcatcggcgacgtcaactgctccgtcgcg
agcctctcgctctccggaacgaatgccatcaccgccacctggccccgaagtgcgaagccg
gcgggcggcacctgccaggtcccgtacacggtggtggatgcccagggcaggcagggccag
ggaactctcgctctcgacgtgcagggttaccccgccgtgccgaactccatcacgacggct
gcctacaccgccggcagcgtcaccttcctggtcgatctcggcagcgcggcggcggcgcat
ccctcgctcaccggcgtggacatcgaggaagacggcaaaccggtcgcggcgcagtgcgcg
ccgagcgtgccgggcgcctactcgtgcaccgtgtcgggcctcaccaacgggcagccgcac
agcttcactgcacgggccgtcaacgccatcggcgagtcgggcgacacgacacccgtggtg
gcctggtcgtacgagtctccggtcgtgtcgtcggtgacggcgacgcccgacaccccggtg
accgcgaacaccggaacagcgtccatctcgatccgttcgcggcagagcagcggcgtcgcc
tcgttcctgctgcgcgacagctccggtgcgcagaccaccgttcagctgcagggcggtgac
accaccaactacgaatggcagggtctgcccgtcggcacccagaccatcacggtcatcccg
gtgagtcgttaccagccgccgaacggtgcgtggggcggcgcggcgaccggcgatgcgatg
agcgcgaccgtcacgatcgccggggcgcctggcttcagctcagacgggagccttcgcgca
ctctccaacacgtcggtcgagctcgacggtgtgcagccgaacgcgaattacagcgcgaag
accctgtcggtgatctatgccgtgtgggcgtcgggcgactcgacgcccacgtgctccatg
gatcaggacggcagcccgaccattcggggagcgacctcgcagacgagcacggtcttcacg
gggctcgaccagttcacctcgtatcgcggcatggcgtgcgtgtccaacggctaccaggcg
acggcatccaaccccgtctcggtgttcacctggacgagcacgcccggtgtgtccggcagc
tacacctacacggtgggcaccacaccgaagacgtccagcacgggaacatcgaccaccctg
tcgtggaacgacatctccgggccgtcgccgagcgtgcccgggccgccgaacagccgtttc
agcacgcagtacacggcggcggccaccgggcagacgtcgcagagcttcggcgacctgttc
tcctcggaccgcacgccgggaaccatcaccgtcgcgtactgctggaacggcatcagctgc
ggctccgccgcgacgatcgctccgacaggggcgccgacgacggcctgggtgtcggtgcag
acgacgccgacgaccactcccatggtcagcgacctgcagttcagcggatcggtcgacgca
ccgagcggtgacggcctgaccgggtcgtcaggcgacgtggccgtcaccatcaccgtcgac
accacgaccaacgtcgtcacctattcgctggcgttcaccggcgcgtactccgcgttcggc
accgtcaccctgacccgcccctacggctcatga
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