Humibacter ginsenosidimutans: FPZ11_07060
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Entry
FPZ11_07060 CDS
T06119
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
huw
Humibacter ginsenosidimutans
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Paralog
GFIT
Motif
Pfam:
AAA_12
RNase_H_2
AAA_30
AAA_11
PDDEXK_1
AAA_19
NAT10_TcmA_helicase
Viral_helicase1
ResIII
NPHP3_N
AAA_16
SLFN-g3_helicase
AAA_22
nSTAND3
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
QDZ14546
UniProt:
A0A5B8M2P9
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Position
complement(1485478..1489002)
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AA seq
1174 aa
AA seq
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MFLLSDATIVLSPSDLTTASTCEFDFLRRLDGRLGWGPEVARPTDAMLERTSRLGDEHER
RVLDRYVERFGEGVARFERPEHPDVAGLTEAAAATAEAFRAGAPVVYQGVFFDPLHEPDG
AEAGTAVAFVGYADFIVRESDGRYTVEDTKLARRAKVTALLQVAAYALQLERIGIEPSPD
VRLLLGDGSVSTHRLDDILPVYRKRIARLHAIVREHLADGEAVRWGDERFVADGRCDTCA
AEVEANRDVLLTAGLRVTQRPRFVAAGIRTIEDLAASSDDLEVDRVAPSTIASLRQQAQL
QLAAEAGSPPPVVVYNAPALAALPTPDDGDIFFDFEGDPLYTEGDDGQWGIDYLFGVVQT
DGEFQPFWAHTFAEERQALIDFLRDVARRRAEHPGMHIYHYASYERTHLLNLAARHGVGE
DEVDDLLRDNVLVDLYPLVRKAIRVGSRSYSIKKLEPLYMGDELRSGEVQDAGTSIEEYA
TARALLMAGEVEEGRHRLDEIAAYNRYDCVSTLRLRDWLLERAADAGVPIGLPAPEREVP
ELEPSTLRDDLLARAGESAEPHAAGADATRLRTDDETAAAFAAAALDYHKREQKSFWWAH
FARLVDPVEAWANTRDVLVVERAELERDWYRDEGQRSDRRVLRLHGQFGPGSTVKAGRGA
YLLYEFPGPFPAGRGDPGARNTRSVTLVGVGDDWALVEETRADAVPAYDTMPSAITPGPP
PSPGRQKQAIESWCQSIVDATPEWPHDPVTDLLRRVPPRTRGDAVAQRVEAASDDTLVDA
VSRTVADLDDSYLAVQGPPGTGKTYLGAHVIASLVRERHWKIGVVAQSHAVVEHLLASVA
ATAGLDAELVGKVPQTGTEPDDDCPYTVLDKDGQLDFALAHADSGFVVGGTAWDFANPAR
VPVHSLDLLVIDEAGQFSLASTAAAAVAARNLLLLGDPQQLPQVSQGLHPEPVDQSALGW
ISAGHDVLPAELGYFLAQTRRMHPALAAPVSTLSYEGRLRAHPDAATRHLDAVAAGLHPV
PVHHDGDSTESPAEAQRVVEIVESVLGSTWREGGAERPLTDDDIIVVTPYNAQLACVHEA
LAAAGHPQVRVGTVDKFQGREAVLAIVSLAASSAEYAPRGMGFLIMKNRLNVAVSRAKWA
AYVVYSPQLTEHLPHRPEGVAELSAFITLVEGTE
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgctctccgacgccaccatcgtgttgagcccgagcgacctcaccacggcctcg
acgtgcgagttcgactttctgcgccggctcgacggccgtctcggctgggggccggaggtc
gcgcgccccacggatgccatgctcgagcgcacctctcggctcggcgacgagcacgagcgg
cgcgtgctcgacagatacgtcgaacgctttggggagggtgtcgcacgattcgagcggccg
gagcatcccgacgtcgcgggactgactgaggccgctgcggccacggcagaggcgttccgt
gccggcgcacccgtcgtgtaccagggcgtgttcttcgacccgctgcacgagccggacggg
gcggaggccggcaccgccgtggcgttcgtcggctatgccgacttcatcgtgcgcgaatcc
gacggccggtacacggtcgaagacaccaagctcgcccggcgcgccaaggtgacggcgctg
ctccaagtggccgcgtacgcgctgcaactggagcgcatcggcatcgagccgtcgcccgac
gtgcggctgctgctcggcgacggcagcgtgagcacgcatcggctcgacgacatcctgccc
gtctaccgcaagcgcatcgcccggctgcacgccatcgtgcgcgaacacctcgccgacggc
gaggcggtgcgctggggggacgagagattcgtcgccgacggccggtgcgacacgtgtgcc
gcggaggtcgaggcgaaccgcgacgtgctgctcaccgccgggctgcgggtgacgcaacgg
ccgcgcttcgtggcggcgggcatccgcaccatcgaggatctcgcagcgtcgagcgacgat
ctcgaggtcgacagggtcgcaccctccaccatcgcctcgctgcgccagcaggctcagctg
cagctggcggccgaggcggggagcccgcctcccgtcgtcgtgtacaacgcaccggcgctc
gccgcgctgccgacacccgacgacggtgacatcttcttcgacttcgagggagacccgctc
tacaccgagggtgacgacggccagtggggaatcgactacctcttcggcgtcgtgcagacc
gacggcgagttccagccgttctgggcgcacacgttcgccgaggaacggcaggcgctgatc
gactttctgcgcgatgtggccaggcggcgggccgagcatcccggcatgcacatctaccac
tacgcgtcgtacgagcgcacgcacctgctcaacctcgcggccaggcacggcgtgggcgaa
gacgaggtcgacgacctgctgcgcgacaacgtgctcgtcgatctgtacccgctggtgcgc
aaggccatcagagtgggctcgagatcgtactcgatcaagaagctcgagccgctctacatg
ggtgacgagctgcgctccggtgaggtgcaggatgccggcacctccatcgaggagtacgcg
acggccagggcgctgctcatggcgggcgaggtcgaagagggccggcacaggctcgacgag
atcgcggcctacaaccgctacgactgcgtctccacgctgcggttgcgggactggctgctg
gagcgggccgcggatgccggtgtgccgatcggtctgcctgctcccgaacgtgaggtgccg
gaactggaaccgtcgacgctgcgcgacgacctgctggcacgagcgggagagtctgcggag
ccgcacgccgctggtgcggatgccacgcgcctccgcaccgacgacgagaccgcagcggcg
ttcgccgccgccgcgctcgattatcacaagcgcgagcagaagagcttctggtgggcgcac
ttcgcccgactggtcgacccggtcgaggcgtgggcgaacaccagggacgtgctcgtcgtc
gaacgagcggagctcgagcgggactggtaccgcgacgagggccagcgctccgatcgacgc
gtgctgcggctgcacgggcagttcggccctggcagcaccgtcaaggcgggtcgtggtgcc
tacctgctgtacgagtttcccggcccgttccccgcggggcgcggcgatccgggggctcgc
aacactcgctcggtgacgctcgtgggggtcggcgacgactgggcgctggtcgaggagacg
agggcggatgccgttcccgcctacgacaccatgccgagcgccatcacaccggggccaccg
ccctcgcccggcaggcagaagcaggccatcgagtcgtggtgccagtcgatcgtcgacgcc
acgcccgagtggccgcacgatcccgtgaccgatctgctgcggcgcgtcccgccgcgcacc
agaggcgacgcggtggcgcagcgggtggaggcggcgtccgacgacacgctcgtcgacgcg
gtgtcacgcacggtggccgatctcgacgactcctacctcgcggtgcaaggccctcccgga
accggcaaaacctacctcggcgcccacgtgatcgcctcgctcgtgcgcgagcggcactgg
aagatcggtgtggtggcgcagtcgcacgccgtggtcgagcatctgctcgcctcggtcgcc
gccaccgcgggactcgacgccgagctggtgggcaaggttccgcagacgggtacagagccc
gacgacgactgcccgtacacggtgctcgataaagacggtcagctcgacttcgcgctcgcg
cacgccgacagcggcttcgtggtgggcggaacggcgtgggatttcgccaatccggcgcgc
gttcccgtgcacagcctcgacctgctcgtcatcgacgaggccggccagttctcgctggcc
tccacggccgccgcggccgtcgccgcgcgcaacctgctgctgctcggcgatccgcagcag
ttgccgcaggtgagccaggggctgcatcccgagcccgtcgaccagtcggcgctcgggtgg
atcagcgccggacacgacgtgctgcccgccgagctcggctacttcctggcgcagaccagg
cgaatgcatccagcactcgccgcgcccgtctcgacgctgtcgtacgagggcaggctgcgc
gcgcacccggatgccgccactcgccacctcgacgccgtcgcggcgggcctgcaccccgtt
cccgtgcaccacgacggtgactccaccgagtcgcccgccgaggcgcagcgtgtggtggag
atcgtcgagtccgtgctcggctcgacgtggcgcgagggcggcgccgagcgcccgctgacc
gacgacgacatcatcgtggtcaccccgtacaacgcgcagctggcctgcgtgcacgaggcg
ctggccgcggcggggcatccacaggtgcgagtgggcaccgtcgacaagttccagggcagg
gaggccgtgctcgcgatcgtctcgctggccgcgtcgtcagccgaatatgccccgcgcggc
atgggctttctcatcatgaagaaccggctcaacgtcgccgtctcacgggcgaaatgggcg
gcgtacgtcgtctactcgccgcagctcaccgagcacctgccgcaccggccggagggcgtc
gccgaactgagtgcgttcatcacgctggtcgaggggacggagtga
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