Humibacter ginsenosidimutans: FPZ11_07320
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Entry
FPZ11_07320 CDS
T06119
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
huw
Humibacter ginsenosidimutans
Pathway
huw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FPZ11_07320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
huw03400
]
FPZ11_07320
Enzymes [BR:
huw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FPZ11_07320
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FPZ11_07320
DNA repair and recombination proteins [BR:
huw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FPZ11_07320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Zn_ribbon_TFIIB
zf-FPG_IleRS
DUF7577
Motif
Other DBs
NCBI-ProteinID:
QDZ14591
UniProt:
A0A5B8M358
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All DBs
Position
1548958..1549887
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AA seq
309 aa
AA seq
DB search
MPELPEVHALAADLDGRLRGHVVDRLDVTAFAALKTFDPPVSALHGMLVASVGRHGKFLD
ATLVASSASAVSDERGGAGRRADGELHLIIHLARAGWIRRRDAAPIPSARPRGRSTGPLA
ARLVLDDGSGLDITEAGTKKSLAIWLVRNPDDVPGIANLGPDPLAPEFTEQVLAGILAAA
GRSQLKGVLRSQSRIAGIGNAYSDEILWAAKMSPFKPADMPPGDVHTLYEAMQRMLREAL
ERADGLKASELKAEKKSNLNVHGRFGEPCPRCGDTIRQVIYADSTFQYCPTCQTGGKPLA
DRVLSRLLK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagttacccgaagtgcatgccctggcggccgacctcgacggtcgactgcgaggc
cacgtcgtcgacagactcgacgtcaccgcgttcgcggcgctcaagacgttcgacccgccg
gtgtcggcgctgcacgggatgctcgtggcgagcgtcggacggcacggcaagttcctcgat
gccacgctcgttgcctcctctgcgagcgcggtgagcgacgagcgcggaggtgcggggcga
cgcgcagacggcgagctgcacctgatcatccatctggcgcgcgccggatggatccgccgg
cgcgacgccgcgcccatcccgagcgcacgacctcggggtcgcagcacaggtccgctcgct
gcccggctcgtgctcgacgacggctccggtctggacatcaccgaggcgggcaccaagaag
agcctcgcgatctggctggtgcgcaaccccgacgatgtgccgggcatcgcgaacctcggc
cccgatccgctcgcgccggaattcaccgagcaggtgctggcgggcatcctcgcggccgca
gggcggtcgcagctcaagggtgtgctgcgcagccagtcgcgcatcgcaggcatcggcaac
gcgtactccgacgagattctgtgggcggcgaagatgtcgccgttcaagcccgccgacatg
ccaccgggtgatgtgcacaccctctacgaggcgatgcagaggatgctccgcgaggccctc
gaacgcgcagacggcctgaaggcctccgagctcaaggcggagaagaagtcgaacctcaat
gtgcacgggcgcttcggcgagccgtgtccgcgctgcggcgacacgatcaggcaggtgatc
tatgcggactcgaccttccagtactgcccgacctgccagaccggaggcaagccgcttgcc
gaccgcgtcctgtcgcggctgctgaagtag
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