Humibacter ginsenosidimutans: FPZ11_09045
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Entry
FPZ11_09045 CDS
T06119
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
huw
Humibacter ginsenosidimutans
Pathway
huw03420
Nucleotide excision repair
huw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FPZ11_09045
03430 Mismatch repair
FPZ11_09045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
huw03400
]
FPZ11_09045
Enzymes [BR:
huw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FPZ11_09045
DNA repair and recombination proteins [BR:
huw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FPZ11_09045
MMR (mismatch excision repair)
Other MMR factors
FPZ11_09045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AAA_11
TPR_TNPO3_IPO13_4th
ResIII
AAA_16
PAC4
Motif
Other DBs
NCBI-ProteinID:
QDZ14887
UniProt:
A0A5B8M2S2
LinkDB
All DBs
Position
complement(1959471..1961975)
Genome browser
AA seq
834 aa
AA seq
DB search
MTTPDDTPVLDDATRDPEAFRASAPIILDGVDVGIDDRSFRPHGESGDTLLDGLNPQQRE
AVEYRGPALLIVAGAGSGKTRVLTHRIASLLANREAWPSQILAITFTNKAAAEMRERVEA
LVGESAQGMWISTFHSACVRILRREAENFGYNRNFTIYDAGDSKALLKRIIKELEADTFG
FTPGSAAARISKLKNELSDVDSFARTADRSDPKEAMFLEIFRTYTRELARASAFDFDDLI
GQTVYLFRAFPHIAALYQRRFRHILVDEYQDTNHAQYELIHALTQPIEPDEVAELEAKDY
NLGKLVDATGRVPGASLTVVGDSDQSIYAFRGADIRNISEFERDFPGARVVLLEQNYRSS
QNILSAANSVIANNFDRKDKKLWSAGGDGEKIIGYTGYSGHDEAQFVADEIEKLHSAGVP
YNEIAVFYRTNSQTRALEEIFIRSALPYRIMGGTKFYERAEIKDAMAYLIAVANPADEMA
LRRVLNTPKRGIGPATEAQLAGYAEANGFTFRQAMRDAGSLGMGPKVTSAIVELARLLDE
GATMIDPENPAGQSKVSDVLVHLLKGSALVESLRASRDPQNEARAENVEELVAVTKEFER
NNPEGGLVEFLTEVSLVAAADEIDDASGTVSLMTLHTAKGLEYDAVFITGVEEELLPHRM
SANEPGGPAEERRLFYVGITRARKRLYLSLAMTRAQFGDVAVALPSRYLQEIPAELIEWK
QSPGFANSRGGTQSRALNARRASRQPDRGLSGAGGSFGAKPEIPASAWPNRVTAQVRDNG
DLTLEPGDRIRHVDFGDGKVTAVTGEGSKRVAHVQFEKSGAKKLLIKIAPIEKL
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcctgacgacacccctgttctcgacgacgcgacgcgcgaccccgaagcgttc
agggcatccgccccgatcattctcgacggggtcgacgtgggcatcgacgaccgctcgttc
cgaccgcacggcgagagcggagacacgctgctcgacgggctgaacccgcagcagcgcgag
gccgtcgagtaccgcggtccggcgttgttgatcgtcgccggcgccggatcgggcaagaca
cgtgtgctcactcaccgcatcgcgagcctgctcgcgaaccgagaggcgtggcccagccag
atcctcgcgatcacgttcaccaacaaggccgccgccgagatgcgcgaacgcgtcgaggcg
ctcgtcggtgagagcgcgcagggcatgtggatctcgacgttccattcggcgtgcgtgcgc
atcctgcgccgcgaggccgagaacttcggctacaaccgcaacttcaccatctacgacgcc
ggcgactcgaaggcgctgctcaagcgcatcatcaaggagctcgaggccgacacgttcggg
ttcacgcctggcagcgccgctgcccgcatctccaagctcaagaacgagctgtccgacgtc
gattccttcgcgcgcacggcggaccggtcggatccgaaggaggcgatgttcctcgagatc
ttccgcacctacaccagggagctggcgcgggcgagtgccttcgacttcgatgacctgatc
ggtcagacggtctacctcttccgcgcgttcccgcacatcgctgcgctctatcagcgacgg
ttcaggcacatcctggtcgacgaatatcaagacaccaaccacgcccagtacgagctcatc
cacgcgctcacccagcccatcgagcccgacgaagtggccgagctggaggcgaaggactac
aacctcggcaagttggtggatgccacggggcgggtgccgggggcatccctcaccgtggtc
ggcgactccgaccagtcgatctacgcgttccgcggtgcggacatccgcaacatctccgag
ttcgagcgcgacttccccggcgccagggtggtgctgctggagcagaactaccgttcgagc
cagaacatcctctcggcggccaactcggtcatcgccaacaacttcgatcgcaaagacaag
aagctgtggtcggcgggcggcgacggcgagaagatcatcggctacacgggctactcgggc
cacgacgaggcgcagttcgtcgccgacgagatcgagaagctgcacagcgcgggcgttccc
tacaacgagatcgccgtcttctaccgcaccaactcgcagacgcgtgcgctggaggagatc
ttcatccgctccgctctgccgtaccgcatcatgggcggcaccaagttctacgagcgggcc
gagatcaaggatgcgatggcctacctcatcgccgtcgccaaccccgccgacgagatggcg
ttgcggcgcgtgctgaacacgccaaagcgcggcatcggtcccgccaccgaggcacagctc
gccggctatgccgaggcgaacgggttcacgttccgccaggcgatgcgggatgccggctcc
ctcggcatgggtccgaaggtcacctccgcgatcgtcgagctcgcgcgcctgctcgatgag
ggcgcgaccatgatcgatcccgagaatccggcgggccagtcgaaggtgagcgacgtgctc
gtgcacctgctcaagggctcggccctcgtcgagtcgctgcgcgccagccgcgacccgcag
aacgaggcgcgtgcggagaacgtggaggagctcgtcgccgtcaccaaggagttcgagcgc
aacaacccggagggtgggctcgtcgagttcctcaccgaggtgtcgctcgtggccgccgcc
gacgagatcgacgacgccagcggcaccgtctctctcatgacgctgcacacggcgaagggc
ctcgaatacgacgccgtgttcatcaccggcgtcgaggaggagctgctgccgcatcgcatg
tcggcgaacgagccgggcggcccggctgaggagcgtcggctgttctacgtgggcatcacc
cgtgcccgcaagcggctctacctgtcgctggccatgaccagggcgcagttcggcgacgtc
gcggtggcgctgcccagtcgatacctgcaggagatccccgccgagctcatcgagtggaag
cagtcgccgggattcgcgaactcccgcggcggcacgcagtcccgcgcactcaacgcgaga
agagcgagccgccagcccgatcgcggcctctccggtgcaggcgggtcgttcggagcgaaa
ccggagattccggcatccgcgtggcccaaccgggtcaccgcgcaggtgcgcgacaacggc
gacctcacgctcgagcccggcgatcgcatccgtcacgtcgacttcggcgacggcaaggtc
acggcggtgacgggcgagggcagcaaacgggtggcgcacgtgcagttcgagaagtcgggc
gcgaagaagctgctcatcaagatcgcgccgatcgagaagctctga
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