Humibacter ginsenosidimutans: FPZ11_09395
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Entry
FPZ11_09395 CDS
T06119
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
huw
Humibacter ginsenosidimutans
Pathway
huw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FPZ11_09395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
huw03021
]
FPZ11_09395
03400 DNA repair and recombination proteins [BR:
huw03400
]
FPZ11_09395
Enzymes [BR:
huw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FPZ11_09395
Transcription machinery [BR:
huw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FPZ11_09395
DNA repair and recombination proteins [BR:
huw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FPZ11_09395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
AMIN-like
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QDZ14946
UniProt:
A0A5B8M3T1
LinkDB
All DBs
Position
complement(2033937..2034926)
Genome browser
AA seq
329 aa
AA seq
DB search
MLIAQRPTLTEENISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTIPGVKEDVTEIILNIKGLVVSSEHDEPITAYLRKTGSGEVTAADISAPAGVEIHN
PELVIATLNENARFEVELTIERGRGYVSAQQNRNEYSEAGQIPIDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKPAISPRDAIASAGRTLTELFGLARELNNQAEGIEIGPAPVD
AVLSSELSMPIEDLELSVRSYNCLKREGINNVSELVSLSETQLMNIRNFGQKSVDEVKDK
LTEMGLSLKDSVPGFDGSHFYSAGDDEYR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgccccacgctcaccgaagagaacatctccgaattccgctcgcgg
ttcgtcatcgagccgctcgagccgggcttcggctacacgctcggcaactcgctgcgccgc
accctgctgtcgtccattccgggcgcagcggtcacgagcatccgcatcgacggcgtgctg
cacgagttcacgaccatcccgggcgtgaaggaggatgtcaccgagatcatcctcaacatc
aagggtctcgtcgtctccagcgagcacgacgagccgatcaccgcctacctgcgcaagacg
ggcagcggcgaggtcacggctgccgacatctcggctccggcgggcgtggagatccacaac
cccgagctggtcatcgccacgctcaacgagaacgcgcgcttcgaggtcgagctgaccatc
gagcgcggtcgcggctacgtctcggctcagcagaaccgcaacgagtacagcgaggccggt
cagatcccgatcgactccatctactcgccggtgctcaaggtcacctaccgcgtggaggcc
acgcgtgctggtgagcgcaccgacttcgaccgcctcgtggtcgacgtggagaccaagccg
gcgatcagcccccgggatgccatcgcctccgccggtcgcaccctcaccgagctgttcggt
ctcgcccgcgagctgaacaaccaggcggagggcatcgagatcggccccgcgccggtcgac
gccgtgctcagctccgagctctcgatgcccatcgaggacctcgagctgtcggtgcggtcg
tacaactgcctcaagcgtgagggaatcaacaacgtcagcgaactggtctcgctctccgag
acgcagctcatgaacatccgcaacttcggtcagaagtccgtggatgaggtgaaggacaag
ctgacggagatgggcctgtcgctcaaggactctgttcccgggttcgacggctcccacttc
tacagcgcaggcgacgacgagtaccgctga
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