KEGG   Humibacter ginsenosidimutans: FPZ11_10045
Entry
FPZ11_10045       CDS       T06119                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
huw  Humibacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:huw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:huw03400]
    FPZ11_10045
Enzymes [BR:huw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FPZ11_10045
    5.6.2.6  RNA 3'-5' helicase
     FPZ11_10045
DNA repair and recombination proteins [BR:huw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FPZ11_10045
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr DEAD WH2_Lhr Helicase_C ResIII DUF6406 PhoH ANTAR
Other DBs
NCBI-ProteinID: QDZ15066
UniProt: A0A5B8M441
LinkDB
Position
2179342..2184282
AA seq 1646 aa
MSEVLERFSPATRAWFEGAFEAPTAAQLGAWDAISRGEHTLVIAPTGSGKTLASFLWAID
RLMHEAVEPGMLAGLEAPTGGTATGSKKTRGTRVLYISPLKALGVDVERNLRSPLVGITQ
TAKRLGTEPPRVTVGVRSGDTPANERRTLLTKPPDILITTPESLFLMLTSQARETLANVQ
TVIVDEVHAVAATKRGAHFAVSLERLDAMLPKPVQRVGLSATVRPPEEVARFLGGRNPVT
IVAPASQKRFDLKVVVPVEDMRDVSPSAHDDDQSPQGGSIWPHVEEAIVDRVLEHRSSIV
FANSRRLAERLTARMNEIYEERLSEAAAPFPEHVRRVDGPPVPLGRALDEVDARTGPRSR
TPADLMGGSGQTRGSRAAASVDPFSVSTVMEERRQPREWTAGAGDEGGASSGILARAHHG
SVSKEQRAVIEDDLKTGRLRCVVATSSLELGIDMGEVDLVVQVEAPPSVASGLQRVGRAG
HQVGEVSKGVMFPKHRSDLINTAVASERMVAGLIEELRVPANPLDILAQQTIAATALDPV
DVDGWFDTVRRSAPFATLPRSAFDATLDLVAGRYPSDEFAELRPRVVWDRDRGTLTARPG
AQRLAVTSGGTIPDRGLFGVYMVGTDELNPAKGGRRVGELDEEMVYESRVGDVFALGATS
WRIQEITHDRVLVTPAFGEPGRLPFWKGDGLGRPAELGEAVGGFVREVAAASEQEARGRA
SAAGLDAYATGNLLTYLDDQKKATGHLPTDRTLVAERFRDELGDWRLVLHSPYGMQVHAP
WALAVAARVRERLNIDGSCIASDDGIVVRIPDAEAEPPGADLFVFEADELEQLVTDEVGG
SALFASRFRECAARALLLPKYNPGKRSPLWQQRQKASQLLDVARKHPTFPIILETMRECL
QDVYDLPALRRIAERIAARDIRIVEVGTEEASPFARSLLFGYVGAFMYEGDSPLAERRAA
ALAVDASLLSELLGRAELRELLDPAVIERVEREVQRLTPERRMFGLEGAADLLRLLGPLT
VDEVVQRWSPERPADASSRGLRSDREADGSRNPEPGAGFETAAAPPPQPAEPFAADPAAA
RATLDELVAAKRALRVTIAGAEQYAAIEDSARLRDALGVPLPIGVPTAFIEPVDDPLGDL
LGRYARTHGPFMVGDAASRFGLGAAVAHDTLRRLAQDRRITEGEFRPQASGTEWCDAEVL
RRIRRLSLAALRHEVEPVMPTTFARFLPEWQHVGGGLRGVDAVASVIEQLAGTRIPASAW
ESLVLPARVSDYQPAMLDELTASGEVLWSGSGSLPGNDGWVGLHLADSAAFTMPPPLDHA
MDELQREVLGALGAGGAFFFRQLADAVGSLDDAALATALWDLVWAGLITNDTFAPLRALT
GGRGAHKPQRATPRARVRMPRAYGKPTMVEGLRAASARSGPPTTAGRWSILPLPETDATL
RAKASAETLLDRYGVVTRGSVMAENQPGGFALAYRVLSGFEESGRARRGYFVETLGAAQF
ATSATVDRLRTFTLDGTLEPPRKAVALAATDPANPYGAALPWPQASAEVSATGHRPGRKA
GAIVVLVDGALALYVERGGKTTLLFERDPEVMWPATRALADVIHRGRISTLTIETVGGEF
VLGTPFGEALVAAGFAPTPRGLRLRS
NT seq 4941 nt   +upstreamnt  +downstreamnt
atgagtgaggtgctcgaacgcttctcccccgccacgcgcgcgtggttcgagggtgcgttc
gaggcgcccactgcggcgcagctcggggcgtgggatgccatctcccgcggcgaacacacg
ctcgtcatcgcgccgaccggatcgggcaagaccctcgcctccttcctctgggcgatcgac
cggctgatgcacgaggccgtcgagcccggcatgctcgccgggctcgaggcgccgaccggc
gggacggcgacaggctcgaagaagacccgcggcacccgcgtcctctacatctcccccctg
aaggcgctcggtgtcgacgtggagcgcaacctgcgctcaccgctcgtgggcatcacgcag
acggcgaagcgtctcggcaccgagccgccgcgtgtcacggtcggcgtgcgcagcggcgac
actcccgcgaacgagcgccgcactctgctgacgaagccgccggacatcctcatcaccacg
ccggagtccctcttcctcatgctcacctcgcaggcgcgcgagacgctcgcgaacgtgcag
accgtgatcgtcgacgaggtgcacgcggtcgcggcgaccaagcgcggcgcccacttcgcg
gtgtcgcttgagcgactggacgccatgctgccgaagcccgtgcagcgcgtcggcctctcc
gccacggtacgtccgccggaagaggtggctcgattcctcggcggccgcaacccggtcacg
atcgtggcgccggcgtcccagaagcgcttcgatctgaaggtggtcgtgccggtcgaggac
atgcgcgacgtgagcccgtcggcgcacgacgacgaccagagcccgcagggcggatccatc
tggccgcacgtcgaagaggcgatcgtcgaccgcgtgctcgaacaccgctcctcgatcgtg
ttcgcgaactcgcgacggctcgccgagcgcctcacggcccgcatgaacgagatctacgag
gagcggctgagcgaagcggccgccccgttccccgagcacgtgaggcgcgtcgacgggccg
cccgtgccgctcgggcgagcgcttgacgaggtggatgcccgtactgggccgcggagtcgc
actccggccgatctcatgggcggatccggccagaccaggggaagccgcgccgcggcatcc
gtcgacccgttctcggtgagcaccgtgatggaggagcgcaggcagccgcgggagtggacg
gccggggccggcgacgaggggggcgcgagcagcggcatcctcgcccgcgcccaccacgga
tcggtcagcaaggagcagcgcgccgtcatcgaagacgacctgaagaccggccggctgcgt
tgcgtcgtcgccacgagcagcctcgagctgggcatcgacatgggcgaggtcgacctcgtc
gtgcaggtcgaggcgccgccgtcggtggcgagcggcctgcagcgcgtcggccgcgccggg
caccaggtgggcgaggtgtcgaagggcgtgatgttcccgaagcaccgctccgacctcatc
aacacggcggtggccagcgagcgcatggtcgcggggctcatcgaggagctgcgggtgccg
gcgaacccgctggacatcctcgcgcagcagaccatcgcggccacggccctcgacccggtg
gatgtcgacggctggttcgacaccgtgcgtcgcagcgctccgttcgccacgctcccccgc
agcgcgttcgacgccacgctcgacctcgtggccggtcggtatccgagcgacgagttcgcg
gagctgcggccacgcgtggtgtgggacagagaccgcggcacgctcaccgcacgcccagga
gcgcagcggctcgcggtgacgagcggtggcaccatccccgatcgcggcctgttcggcgtg
tacatggtgggcaccgacgagctgaaccccgccaagggcgggcgtcgcgtcggtgagctc
gacgaggagatggtctacgagtcgcgggtcggcgacgtgttcgcgctcggagcgacgagc
tggcgcatccaggagatcacgcacgaccgggtgctcgtcacgccggcgttcggcgagcca
gggcggctgccgttctggaagggcgacggcctcggccgaccggccgaactgggcgaagcg
gtcggggggttcgtgcgcgaggtggcggcggcatccgagcaggaagcccgcggccgggcc
tccgccgccggcctcgacgcgtacgccaccggcaacctgctcacgtacctcgacgaccag
aagaaggcgaccggacacctgccgaccgaccgcacgctcgtggccgagcggttcagggac
gagctcggagactggcgactcgtcttgcattccccgtacggcatgcaagtgcatgcgccg
tgggcgctggctgtcgccgcccgcgtgcgcgagcggttgaacatcgacggctcgtgcatc
gccagcgacgacggcattgtggtgcgcatccccgacgccgaggccgagccgcctggcgcc
gacctgttcgtgttcgaggccgacgagctggagcagctggtcaccgacgaggtcgggggg
tcggcgctgttcgcgtcccgcttcagggagtgcgccgcccgcgcactgctgctgcccaag
tacaaccccggcaagcggtcaccgctgtggcagcagcgtcagaaggcgtcgcagcttctg
gatgtcgcgcgcaagcatccgacgttcccgatcatcctcgagaccatgcgcgagtgcctg
caagacgtctacgacctgccggccctgcgccgcatcgcggagcgcatcgccgcgcgggac
atccgcatcgtcgaggtcggcaccgaagaggcatcaccgttcgcccggtcgctgctgttc
ggatatgtcggtgcgttcatgtacgagggcgactcgccgctcgccgagcgccgagcggcg
gccctcgcggtggatgcctcgttgctgtccgagctgctcggtcgcgccgagctgcgcgag
cttctcgaccccgcggtgatcgagcgcgtcgagcgcgaggtgcaacggctgacgccggaa
cgccggatgttcgggctcgagggcgcggccgacctgctgcgcctgctcggcccgctcacc
gtcgacgaggtcgtgcagcggtggtcgcctgagcgaccggcggacgcgtcgtctcgtggg
ttgaggagcgaccgcgaagcggacgggtctcgaaaccccgagccgggcgcgggtttcgag
acggcggctgcgccgcctcctcaaccggcggagccgttcgcggccgaccccgccgcggca
cgcgccaccctcgacgagctcgtcgcggcgaagcgcgccctgcgcgtcaccatcgcgggc
gccgagcagtacgcggcgatcgaggattccgcccgtctgcgcgatgcgctcggtgttccg
ctgccgatcggcgtgccgaccgcgttcatcgagccggtcgacgacccgctgggcgacctg
ctcggtcggtacgcgcgaacgcacggtccgttcatggtcggcgatgcggcatcccgcttc
gggctcggcgccgcggtcgcccacgacacgctgcgccgcctcgcccaggatcggcgcatc
acggagggcgagttccggccgcaggccagcggcaccgagtggtgcgatgcggaggtgctg
cggcgcatccgtcggctctcgctcgccgcgctccgccacgaggtcgaacccgtcatgccg
acgacgttcgcgcggttcctgcccgagtggcagcacgtgggcggcgggcttcggggagtg
gatgccgtggcgtccgtcatcgagcagctcgccggcacacgtattcccgcgtcggcatgg
gagagtctcgtgctgccggcgcgcgtctccgactaccagccggccatgctcgacgagctc
accgccagcggcgaggtgctgtggagcggcagtggatcgctgccgggcaatgacggctgg
gtcggcctgcacctcgccgacagtgcggcgttcaccatgccgccgccgctcgatcacgcg
atggacgagctgcagcgcgaggtgctcggggcactcggtgccggcggcgccttcttcttc
aggcagctggcggatgccgtcggctcgctcgacgacgcagccctcgccaccgcgctctgg
gatctcgtctgggccggcctcatcacgaacgacacgttcgctccgcttcgcgcgctcacc
ggtggccgcggtgcgcacaagccgcagcgtgcgacacctcgcgcaagggttcggatgccc
agggcatacggcaagcccacgatggtcgagggcctgcgtgccgcgtcggcacgctccggt
ccgccgaccacggcgggccgctggtcgatcctccccttgccggagacggatgccacgctg
cgcgcgaaggcctccgccgagacgctgctcgaccgctacggcgtcgtcacgcgaggctcc
gtcatggccgagaaccagcctggaggcttcgcgctcgcctaccgggtgctcagcgggttc
gaggagtccggccgcgcccgccgtggctatttcgtggagacgctcggcgccgcgcagttc
gcgaccagcgccaccgtcgaccggctgcgcacgttcacgctcgacggcacgctcgaaccg
ccgcgcaaggccgtcgcgttggcggcgaccgacccggcgaatccgtacggggccgcgctg
ccgtggccgcaggcatccgccgaggtgtcggcgaccgggcaccgtcctggacgaaaggcc
ggcgcgatcgtcgtgctcgtcgacggggcgctcgctctctacgttgagcgtggtggcaag
accacgctgttgttcgaacgcgaccccgaggtgatgtggccggcgacgcgggcgctggcc
gacgtcatccaccgcggccgcatctcgacgctgacgatcgagaccgtcggcggcgagttc
gtgctcggcacgccgttcggcgaggcgctcgtggcggcggggttcgcgccgacgccgcgc
ggcctgaggctgcgctcgtga

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