Humibacter ginsenosidimutans: FPZ11_10415
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Entry
FPZ11_10415 CDS
T06119
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
huw
Humibacter ginsenosidimutans
Pathway
huw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FPZ11_10415 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
huw01007
]
FPZ11_10415 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
huw03016
]
FPZ11_10415 (lysS)
Enzymes [BR:
huw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FPZ11_10415 (lysS)
Amino acid related enzymes [BR:
huw01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FPZ11_10415 (lysS)
Transfer RNA biogenesis [BR:
huw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FPZ11_10415 (lysS)
Prokaryotic type
Other AARSs
FPZ11_10415 (lysS)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QDZ15129
UniProt:
A0A5B8M521
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All DBs
Position
complement(2276528..2278075)
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AA seq
515 aa
AA seq
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MADEPRADELSADEVSEQKAVRLAKRERLIAEADAAGGAYPVTLPITSTIPELRAEYGEL
EADAATGVQVGVAGRIVHLRNTGKLCFAALQAGDGSRIQAMVSLASVGEESLARWKELVD
LGDHVFVHGEVISSRRGELSIMVDEWTIAAKAILPLPNLHNELSEETRMRSRYLDLIARE
QARLNVVNRGKAVASLRATFASRGFIEVETPMLQTMHGGASARPFVTHSNAFDTELYLRI
APELFLKRAVVGGIERVFEINRNFRNEGADSTHSPEFAMLEAYQAYGDYNTMAELTRTLI
QDAAWATSGGHVVTWADGTEYDLGGEWDSVSMYESLTDALTQAVSDGRVPWTGGTDITPE
TPLNELAALAELLEIEVKHPIHGKYVEELWEHFVKGGLERPTFVRDFPVDTSPLVRAHRS
KVGVVEKWDLYIRGFELATGYSELVDPVVQRERFVEQARLAAQGDDEAMRLDEEFLRALE
FGMPPSGGMGMGIDRLLMALTGLGIRETILFPLVK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgagccacgcgcagacgaactgagcgctgacgaggtcagcgagcagaaggcc
gtgcggctcgccaagcgcgagcggctgatcgccgaggctgatgccgcgggcggcgcctat
ccggtcaccctcccgatcacgtcgacgatcccggagctgcgtgccgagtacggcgagctc
gaggcggatgccgccaccggtgtgcaggtcggcgtcgccggtcgcatcgtgcatctccgc
aacaccggcaaactgtgcttcgccgcgctgcaggcgggtgacggctcgcgcatccaggcg
atggtgtcgctcgcgtcggtgggcgaggagtccctcgctcgctggaaggagctcgtcgac
ctcggcgaccacgtgttcgtgcacggtgaggtcatctcgtcgcgtcgcggggagctctcg
atcatggtcgacgagtggacgatcgccgcgaaggcgatcctgccgctgcccaatctgcac
aacgagctctccgaagagactcgcatgcgcagcaggtatctcgacctcatcgcccgcgag
caggcccgtctcaacgtggtgaatcgcggcaaggccgtggcgtcgctgcgcgccaccttc
gcctcgcgcggcttcatcgaggtggagacgccgatgctgcagacgatgcatggcggggca
tccgctcgcccgttcgtcacgcactcgaacgcgttcgacaccgagctctacctgcgcatc
gcgccggagctgttcctcaagcgcgccgtcgtgggcggcatcgagcgggtgttcgagatc
aaccgcaacttccgcaacgagggcgccgactccacgcactcgcccgagttcgccatgctc
gaggcctaccaggcgtacggcgactacaacacgatggcggagctgacgcgcacgctcatc
caagacgcggcatgggctaccagcggcggccacgtcgtgacctgggccgacggcaccgag
tacgacctcggcggcgagtgggactcggtctcgatgtacgagagcctcacggatgccctc
acgcaggccgtctccgacggtcgcgttccgtggaccggcggtaccgacatcactcccgag
actcccctcaacgagctggcggctctcgccgagctgctcgagatcgaggtgaagcacccc
atccacggcaagtacgtcgaggagctgtgggagcacttcgtcaagggcggcctggagcgg
ccgacgttcgtgcgcgacttcccggtcgacacctcgccgctggtgcgcgcgcaccgctcc
aaggtgggcgtcgtcgagaagtgggacctctacatccgcggcttcgagctcgccaccgga
tactccgagctcgtcgaccccgtcgtgcagcgtgagcgtttcgtggagcaggccaggctg
gcggcgcagggcgacgacgaggcgatgcgcctcgatgaggagttcctgcgcgccctcgag
ttcggcatgcccccgtcgggcggcatgggcatgggcatcgaccgcctgctgatggccctg
acgggccttggcatccgggaaaccatcctcttccccctggtgaagtag
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