Humibacter ginsenosidimutans: FPZ11_12900
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Entry
FPZ11_12900 CDS
T06119
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
huw
Humibacter ginsenosidimutans
Pathway
huw03030
DNA replication
huw03430
Mismatch repair
huw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FPZ11_12900
03430 Mismatch repair
FPZ11_12900
03440 Homologous recombination
FPZ11_12900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
huw03032
]
FPZ11_12900
03400 DNA repair and recombination proteins [BR:
huw03400
]
FPZ11_12900
Enzymes [BR:
huw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FPZ11_12900
DNA replication proteins [BR:
huw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FPZ11_12900
DNA repair and recombination proteins [BR:
huw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FPZ11_12900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
QDZ15541
UniProt:
A0A5B8M5Q0
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All DBs
Position
2794222..2795367
Genome browser
AA seq
381 aa
AA seq
DB search
MRFQANRDVLSEAVSFTVKLLPQRTTLPILSGILISTTDAGISLSAFDYEVSAQTEITAD
VQEPGTVLVSGRLLAEIASKLPNAPVTFATDDNRIVVSCGSASFTLLSMPVEEYPTLPQI
SGESGLVPADEFSEAVGQVAVAASRDDVTPVITGVQLEITENRLSLVATDRYRVAVREID
WDGTIGQSEPSTALVPARTLQEIGKTFGHNGTITVTLVSKDDRELIAFTAEKKTVTSLLI
KGNFPPVKRLFPETVDNYAVINTADLIDATRRVSLVLEREAALRFSFTADGLTLEAIGSE
QAQASESIDALLTGDDTVVSLKPQFLLDGLSAVHSEYVRISFTKTDNPNKPGPVLITSQT
SKEQAGSDSYRYLLQPNLLLR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtttcaggccaaccgcgatgtgctgagcgaagcagtttcgttcaccgtcaaactt
ctgccccagcgcaccacgctgcccatcttgagcggcatcttgatcagcacgacggacgcc
ggcatctcgctctccgccttcgactacgaagtgtcagcccagaccgagatcacggccgat
gtgcaagagcccggcaccgtgctcgtttccggtcggctgctcgcagagatcgcttcaaag
ctgccgaacgcccccgtgacgttcgccaccgacgacaaccgcatcgtcgtcagctgcgga
tccgcgagcttcaccctcctgtccatgccggtcgaggaatatcccacccttccgcagatc
tccggtgagtccgggctcgttcccgccgacgagttctccgaggctgtcggccaggtggcc
gtcgcggcatcgcgcgacgacgtcacacccgtgatcaccggtgttcagctggagatcacg
gagaaccgcctcagcctcgtggcgaccgaccgctaccgcgtggccgtgcgcgagatcgac
tgggacggcaccatcggtcagtccgagccctcgacagccctggttccggcgcgcactctg
caagagatcggcaagacgttcggtcacaacggcacgatcacggtgacgctcgtctccaag
gacgatcgcgaactcatcgccttcaccgccgagaagaagacagtgacgtctttgctgatc
aagggcaatttcccgccggtcaaacgactcttccccgagactgtcgacaactacgcggtc
atcaacaccgccgacctcatcgacgcgacccgacgcgtgtcgctcgtgctcgaacgcgaa
gcggcgctgcggttctccttcaccgcagacggactcaccctcgaggcgatcggctccgag
caggcacaagcatccgagagcatcgacgctcttctcacgggagacgacaccgtcgtctcc
ctcaagccccagttcctgctcgacggcctgtcggcggtgcactcggagtacgttcgcatc
tcgttcaccaagacggacaatccgaacaagcccggcccagtgctcatcacgagtcagacc
agcaaagaacaggcggggagcgacagctaccgttatctgctgcagccgaacctgctgttg
cgctga
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